Date:2005/06/24
Method:Fisher test
Cut off P-value:0.05
Target dataset(s): AraCyc pathways
Query dataset(s): SOM Cluster
 
salicylic acid biosynthesis ABCDPP'N
   Cluster:6-2 3173244854.998933E-40.00149967993
      RAFL09-11-L22At3g53260 / phenylalanine ammonia-lyase (PAL2)
     
EC:4.3.1.5
phenylalanine ammonia-lyase
      RAFL04-13-B02At2g37040 / phenylalanine ammonia lyase (PAL1)
     
EC:4.3.1.5
phenylalanine ammonia-lyase
      RAFL04-16-D08At3g53260 / phenylalanine ammonia-lyase (PAL2)
     
EC:4.3.1.5
phenylalanine ammonia-lyase
gluconeogenesis ABCDPP'N
   Cluster:0-1 16903145261.345045E-152.152072E-1416
      RAFL07-18-C20At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-15-L04At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-14-L16At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL08-18-C10At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-12-E12At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-07-I23At1g56190 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL04-13-J02At3g54050 / fructose-bisphosphatase precursor
     
EC:3.1.3.11
fructose-bisphosphatase//phosphoric ester hydrolase
      RAFL07-12-M09At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL04-09-D24At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL07-16-P05At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL09-18-L22At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL04-19-O21At4g38970 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-17-N23At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL04-15-A14At1g12900 / calcium-binding protein, calreticulin -related
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL07-18-J01At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL05-07-J06At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
   Cluster:3-0 72264043900.0080702720.1291243616
      RAFL07-17-M04At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL06-07-J21At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL05-21-P13At2g42600 / phosphoenolpyruvate carboxylase
     
EC:4.1.1.49 ,EC:4.1.1.31
phosphoenolpyruvate carboxykinase (ATP)
phosphoenolpyruvate carboxylase
      RAFL09-09-M02At3g47520 / malate dehydrogenase (NAD), chloroplast, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL04-17-F02At2g01140 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL06-14-K01At3g04120 / glyceraldehyde-3-phosphate dehydrogenase C subunit (GapC)
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL06-11-B16At3g52930 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
nitrate assimilation pathway ABCDPP'N
   Cluster:5-2 3123845290.00271202020.0216961618
      RAFL09-13-L09At1g37130 / nitrate reductase 2 (NR2)
     
EC:1.7.1.1
nitrate reductase
      RAFL09-11-J22At1g37130 / nitrate reductase 2 (NR2)
     
EC:1.7.1.1
nitrate reductase
      RAFL11-09-K10At1g37130 / nitrate reductase 2 (NR2)
     
EC:1.7.1.1
nitrate reductase
   Cluster:9-2 265945870.0102892720.082314188
      RAFL08-17-D17At3g53180 / nodulin / glutamate-ammonia ligase - like protein
     
EC:6.3.1.2
glutamate-ammonia ligase
      RAFL06-09-F14At3g53180 / nodulin / glutamate-ammonia ligase - like protein
     
EC:6.3.1.2
glutamate-ammonia ligase
sorbitol fermentation ABCDPP'N
   Cluster:0-1 15912945281.08628985E-141.6294348E-1315
      RAFL07-18-C20At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-15-L04At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-14-L16At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL08-18-C10At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-12-E12At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-07-I23At1g56190 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-12-M09At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL04-09-D24At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL07-16-P05At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL09-18-L22At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL04-19-O21At4g38970 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-17-N23At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL04-15-A14At1g12900 / calcium-binding protein, calreticulin -related
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL07-18-J01At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL05-07-J06At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
   Cluster:1-2 51693944500.02285220.3427829715
      RAFL05-13-B09At5g03300 / pfkB type carbohydrate kinase protein family
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL04-09-G20At2g21170 / triosephosphate isomerase, chloroplast, putative
     
EC:5.3.1.1
triose-phosphate isomerase
      RAFL07-12-L15At1g12000 / pyrophosphate-fructose-6-phosphate 1-phosphotransferase -related
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL07-15-F22At1g20950 / pyrophosphate-dependent phosphofructokinase alpha subunit -related
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL06-13-M02At1g13440 / glyceraldehyde-3-phosphate dehydrogenase -related
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
formaldehyde assimilation I (serine pathway) ABCDPP'N
   Cluster:3-0 72261644148.757928E-50.001050951412
      RAFL07-17-M04At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL05-10-L06At2g13360 / alanine-glyoxylate aminotransferase
     
EC:2.6.1.45
unknown
      RAFL06-07-J21At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL05-21-P13At2g42600 / phosphoenolpyruvate carboxylase
     
EC:4.1.1.31
phosphoenolpyruvate carboxylase
      RAFL09-09-M02At3g47520 / malate dehydrogenase (NAD), chloroplast, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL05-18-J16At2g13360 / alanine-glyoxylate aminotransferase
     
EC:2.6.1.45
unknown
      RAFL05-02-A17At4g32520 / glycine hydroxymethyltransferase (EC 2.1.2.1) - like protein
     
EC:2.1.2.1
glycine hydroxymethyltransferase
aspartate degradation I ABCDPP'N
   Cluster:3-0 2231344270.022491330.0674739853
      RAFL05-21-P13At2g42600 / phosphoenolpyruvate carboxylase
     
EC:4.1.1.32
phosphoenolpyruvate carboxykinase
      RAFL09-07-B08At2g30970 / aspartate aminotransferase, mitochondrial (transaminase A/Asp1)
     
EC:2.6.1.1
aspartate transaminase
   Cluster:6-1 2313343450.0396896640.119068993
      RAFL04-17-L05At5g19550 / aspartate aminotransferase, cytoplasmic isozyme 1 (transaminase A/Asp2)
     
EC:2.6.1.1
aspartate transaminase
      RAFL11-09-A12At5g19550 / aspartate aminotransferase, cytoplasmic isozyme 1 (transaminase A/Asp2)
     
EC:2.6.1.1
aspartate transaminase
TCA cycle variation VII ABCDPP'N
   Cluster:3-0 5228644241.0765596E-47.535917E-47
      RAFL07-17-M04At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL06-07-J21At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL05-21-P13At2g42600 / phosphoenolpyruvate carboxylase
     
EC:4.1.1.32
phosphoenolpyruvate carboxykinase
      RAFL09-09-M02At3g47520 / malate dehydrogenase (NAD), chloroplast, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL07-14-B18At2g47510 / fumarase -related
     
EC:4.2.1.2
adenylosuccinate lyase
tryptophan biosynthesis ABCDPP'N
   Cluster:6-2 2174544820.0262509030.131254515
      RAFL05-01-B07At3g57880 / C2 domain-containing protein
     
EC:2.4.2.18
anthranilate phosphoribosyltransferase
      RAFL06-16-J02At4g30530 / glutamine amidotransferase class-I domain-containing protein
     
EC:4.1.3.27
GMP synthase (glutamine-hydrolyzing)
   Cluster:3-1 2214544420.038449680.19224845
      RAFL05-16-L22At5g48220 / indole-3-glycerol phosphate synthase (IGPS), putative
     
EC:4.1.1.48
indole-3-glycerol-phosphate synthase
      RAFL05-13-G12At1g07780 / phosphoribosylanthranilate isomerase (PAI1)
     
EC:5.3.1.24
phosphoribosylanthranilate isomerase
arginine degradation IX ABCDPP'N
   Cluster:9-0 428946221.2514063E-61.2514062E-510
      RAFL05-21-E06At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
      RAFL04-09-D07At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
      RAFL08-15-L09At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
      RAFL08-09-C23At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
mannitol degradation ABCDPP'N
   Cluster:0-1 799745507.745682E-93.8728412E-85
      RAFL07-18-C20At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL08-18-C10At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-12-E12At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-12-M09At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL04-19-O21At4g38970 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-17-N23At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-18-J01At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
   Cluster:1-2 31711144780.0137206860.0686034265
      RAFL05-13-B09At5g03300 / pfkB type carbohydrate kinase protein family
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL07-12-L15At1g12000 / pyrophosphate-fructose-6-phosphate 1-phosphotransferase -related
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL07-15-F22At1g20950 / pyrophosphate-dependent phosphofructokinase alpha subunit -related
     
EC:2.7.1.11
6-phosphofructokinase
glycolysis I ABCDPP'N
   Cluster:0-1 15912845297.293992E-151.09409884E-1315
      RAFL07-18-C20At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-15-L04At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-14-L16At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL08-18-C10At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-12-E12At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-07-I23At1g56190 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-12-M09At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL04-09-D24At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL07-16-P05At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL09-18-L22At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL04-19-O21At4g38970 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-17-N23At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL04-15-A14At1g12900 / calcium-binding protein, calreticulin -related
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL07-18-J01At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL05-07-J06At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
   Cluster:1-2 51693844510.0208662730.312994115
      RAFL05-13-B09At5g03300 / pfkB type carbohydrate kinase protein family
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL04-09-G20At2g21170 / triosephosphate isomerase, chloroplast, putative
     
EC:5.3.1.1
triose-phosphate isomerase
      RAFL07-12-L15At1g12000 / pyrophosphate-fructose-6-phosphate 1-phosphotransferase -related
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL07-15-F22At1g20950 / pyrophosphate-dependent phosphofructokinase alpha subunit -related
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL06-13-M02At1g13440 / glyceraldehyde-3-phosphate dehydrogenase -related
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
   Cluster:3-1 52113844090.046854520.702817815
      RAFL07-10-P13At1g09780 / 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -related
     
EC:5.4.2.1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
      RAFL05-01-I24At3g55440 / triosephosphate isomerase, cytosolic, putative
     
EC:5.3.1.1
triose-phosphate isomerase
      RAFL05-21-G03At3g22960 / pyruvate kinase, putative
     
EC:2.7.1.40
pyruvate kinase
      RAFL04-13-O10At2g29560 / enolase (2-phospho-D-glycerate hydroylase) -related
     
EC:4.2.1.11
phosphopyruvate hydratase
      RAFL09-12-D13At5g52920 / pyruvate kinase, putative
     
EC:2.7.1.40
pyruvate kinase
trehalose biosynthesis II ABCDPP'N
   Cluster:10-2 1108145530.04620950.0924192
      RAFL07-14-D12At4g12430 / trehalose-6-phosphate phosphatase, putative
     
EC:3.1.3.12
trehalose-phosphatase
triacylglycerol degradation ABCDPP'N
   Cluster:9-1 294645610.01083380450.065002836
      RAFL08-09-J19At1g02660 / lipase (class 3) family
     
EC:3.1.1.3
triacylglycerol lipase
      RAFL05-18-O21At2g30550 / lipase (class 3) family
     
EC:3.1.1.3
triacylglycerol lipase
   Cluster:10-2 2107645480.0138281590.082968966
      RAFL11-07-N24At1g10740 / lipase -related
     
EC:3.1.1.3
triacylglycerol lipase
      RAFL08-08-G07At1g73920 / lipase family
     
EC:3.1.1.3
triacylglycerol lipase
GDP-mannose metabolism ABCDPP'N
   Cluster:3-1 2214144460.00621262240.0124252452
      RAFL08-14-D02At2g39770 / GDP-mannose pyrophosphorylase
     
EC:2.7.7.22
unknown
      RAFL08-13-A07At2g45790 / phosphomannomutase -related
     
EC:5.4.2.8
phosphomannomutase
   Cluster:2-2 152246080.0337192750.067438552
      RAFL09-13-E08At2g39770 / GDP-mannose pyrophosphorylase
     
EC:2.7.7.22
unknown
TCA cycle variation IV ABCDPP'N
   Cluster:3-0 52281944110.00580607260.0870910915
      RAFL07-17-M04At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL06-07-J21At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL05-21-P13At2g42600 / phosphoenolpyruvate carboxylase
     
EC:4.1.1.32
phosphoenolpyruvate carboxykinase
      RAFL09-09-M02At3g47520 / malate dehydrogenase (NAD), chloroplast, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL07-14-B18At2g47510 / fumarase -related
     
EC:4.2.1.2
adenylosuccinate lyase
   Cluster:2-0 31472144920.0402716470.604074715
      RAFL09-06-L20At1g65930 / isocitrate dehydrogenase (NADP+), putative
     
EC:1.1.1.42
3-isopropylmalate dehydrogenase
      RAFL09-07-F20At1g65930 / isocitrate dehydrogenase (NADP+), putative
     
EC:1.1.1.42
3-isopropylmalate dehydrogenase
      RAFL09-11-A18At1g65930 / isocitrate dehydrogenase (NADP+), putative
     
EC:1.1.1.42
3-isopropylmalate dehydrogenase
TCA cycle -- aerobic respiration ABCDPP'N
   Cluster:3-0 42292444060.0484475870.8720565418
      RAFL07-17-M04At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37 ,EC:1.1.99.16
malate dehydrogenase
      RAFL06-07-J21At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37 ,EC:1.1.99.16
malate dehydrogenase
      RAFL09-09-M02At3g47520 / malate dehydrogenase (NAD), chloroplast, putative
     
EC:1.1.1.37 ,EC:1.1.99.16
malate dehydrogenase
      RAFL07-14-B18At2g47510 / fumarase -related
     
EC:4.2.1.2
adenylosuccinate lyase
lactose degradation IV ABCDPP'N
   Cluster:3-2 2352346030.01638780.278592617
      RAFL09-16-F08At3g23820 / NAD-dependent epimerase/dehydratase family
     
EC:5.1.3.2
UDP-glucose 4-epimerase
      RAFL09-07-D12At3g23820 / NAD-dependent epimerase/dehydratase family
     
EC:5.1.3.2
UDP-glucose 4-epimerase
arginine degradation II ABCDPP'N
   Cluster:9-2 265845880.0084968440.067974758
      RAFL09-13-D07At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
      RAFL08-11-N01At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
   Cluster:10-2 2107845460.0215566460.172453178
      RAFL08-15-A08At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
      RAFL04-13-O07At3g22200 / 4-aminobutyrate aminotransferase (gamma-amino-N-butyrate transaminase/GABA transaminase/beta-alanine--oxoglutarate aminotransferase)
     
EC:2.6.1.19
4-aminobutyrate transaminase//alanine-glyoxylate transaminase
leucine degradation II ABCDPP'N
   Cluster:10-2 1108145530.04620950.0924192
      RAFL06-10-M04At2g26800 / hydroxymethylglutaryl-CoA lyase -related
     
EC:4.1.3.4
hydroxymethylglutaryl-CoA lyase
phenylpropanoid biosynthesis ABCDPP'N
   Cluster:9-1 195145660.0407556850.081511372
      RAFL04-13-E17At5g20230 / plastocyanin-like domain containing protein
     
EC:2.1.1.68
caffeic acid /5-hydroxyferulic acid o-methyltransferase
octane oxidation ABCDPP'N
   Cluster:9-0 428846238.7054286E-77.834886E-69
      RAFL05-21-E06At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
      RAFL04-09-D07At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
      RAFL08-15-L09At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
      RAFL08-09-C23At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
lipoxygenase pathway ABCDPP'N
   Cluster:2-2 251546050.00256677070.0154006246
      RAFL05-12-G03At5g42650 / allene oxide synthase / cytochrome P450 74A
     
EC:4.2.1.92
allene oxide synthase
      RAFL06-10-H13At5g42650 / allene oxide synthase / cytochrome P450 74A
     
EC:4.2.1.92
allene oxide synthase
arginine degradation XII ABCDPP'N
   Cluster:9-2 265445920.00293948360.0146974185
      RAFL09-13-D07At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
      RAFL08-11-N01At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
β-D-glucuronide degradation ABCDPP'N
   Cluster:3-2 136046260.0079348060.0079348061
      RAFL08-10-H13At5g07830 / glycosyl hydrolase family 79 (endo-beta-glucuronidase/heparanase)
     
EC:3.2.1.31
beta-glucuronidase
de novo biosynthesis of pyrimidine deoxyribonucleotides ABCDPP'N
   Cluster:2-1 2242244170.015253850.0457615483
      RAFL04-13-M20At4g11010 / nucleoside diphosphate kinase 3 (ndpk3)
     
EC:2.7.4.6
nucleoside-diphosphate kinase
      RAFL04-18-P17At5g35170 / adenylate kinase -related protein
     
EC:2.7.4.9
guanylate kinase
pyridoxal 5'-phosphate biosynthesis ABCDPP'N
   Cluster:0-2 178145830.033600310.067200622
      RAFL04-15-A04At4g15560 / DEF (CLA1) protein
     
EC:4.1.3.37
1-deoxy-D-xylulose-5-phosphate synthase
de novo biosynthesis of pyrimidine ribonucleotides ABCDPP'N
   Cluster:2-0 2148645070.0253399780.126699885
      RAFL04-20-D06At4g09320 / nucleoside-diphosphate kinase
     
EC:2.7.4.6
nucleoside-diphosphate kinase
      RAFL09-12-G17At1g29900 / carbamoylphosphate synthetase -related
     
EC:6.3.5.5
carbamoyl-phosphate synthase
   Cluster:3-1 2214644410.0497271940.248635985
      RAFL07-16-F16At3g20330 / aspartate carbamoyltransferase precursor (aspartate transcarbamylase)
     
EC:2.1.3.2
unknown
      RAFL05-01-N17At5g67220 / nitrogen regulation protein family (NIFR3)
     
EC:1.3.3.1
dihydroorotate dehydrogenase
asparagine biosynthesis I ABCDPP'N
   Cluster:6-1 2313343450.0396896640.158758664
      RAFL04-17-L05At5g19550 / aspartate aminotransferase, cytoplasmic isozyme 1 (transaminase A/Asp2)
     
EC:2.6.1.1
aspartate transaminase
      RAFL11-09-A12At5g19550 / aspartate aminotransferase, cytoplasmic isozyme 1 (transaminase A/Asp2)
     
EC:2.6.1.1
aspartate transaminase
aspartate degradation II ABCDPP'N
   Cluster:3-0 4229644240.00100503550.00603021266
      RAFL07-17-M04At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL06-07-J21At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL09-09-M02At3g47520 / malate dehydrogenase (NAD), chloroplast, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL09-07-B08At2g30970 / aspartate aminotransferase, mitochondrial (transaminase A/Asp1)
     
EC:2.6.1.1
1-aminocyclopropane-1-carboxylate synthase
acetate fermentation ABCDPP'N
   Cluster:0-1 15913645211.3226566E-132.645313E-1220
      RAFL07-18-C20At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-15-L04At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-14-L16At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL08-18-C10At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-12-E12At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-07-I23At1g56190 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-12-M09At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL04-09-D24At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL07-16-P05At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL09-18-L22At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL04-19-O21At4g38970 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-17-N23At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL04-15-A14At1g12900 / calcium-binding protein, calreticulin -related
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL07-18-J01At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL05-07-J06At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
   Cluster:1-2 51694644430.040181750.80363520
      RAFL05-13-B09At5g03300 / pfkB type carbohydrate kinase protein family
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL04-09-G20At2g21170 / triosephosphate isomerase, chloroplast, putative
     
EC:5.3.1.1
triose-phosphate isomerase
      RAFL07-12-L15At1g12000 / pyrophosphate-fructose-6-phosphate 1-phosphotransferase -related
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL07-15-F22At1g20950 / pyrophosphate-dependent phosphofructokinase alpha subunit -related
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL06-13-M02At1g13440 / glyceraldehyde-3-phosphate dehydrogenase -related
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
riboflavin and FMN and FAD biosynthesis ABCDPP'N
   Cluster:1-1 1104145570.044533060.089066122
      RAFL08-12-F18At2g44050 / 6,7-dimethyl-8-ribityllumazine synthase precursor
     
EC:2.5.1.9
riboflavin synthase
flavonoid biosynthesis ABCDPP'N
   Cluster:8-1 2160145000.00351698230.00703396462
      RAFL04-16-O21At5g24530 / oxidoreductase, 2OG-Fe(II) oxygenase family
     
EC:1.14.11.9
flavanone 3-hydroxylase||isopenicillin-N synthase
      RAFL05-17-O13At3g21230 / 4-coumarate:CoA ligase (4-coumaroyl-CoA synthase) (4CL), putative
     
EC:6.2.1.12
4-coumarate-CoA ligase
glycolysis IV ABCDPP'N
   Cluster:0-1 15912945281.08628985E-141.7380638E-1316
      RAFL07-18-C20At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-15-L04At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-14-L16At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL08-18-C10At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-12-E12At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-07-I23At1g56190 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-12-M09At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL04-09-D24At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12 ,EC:1.2.1.9
glyceraldehyde-3-phosphate dehydrogenase
glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase
      RAFL07-16-P05At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL09-18-L22At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL04-19-O21At4g38970 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-17-N23At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL04-15-A14At1g12900 / calcium-binding protein, calreticulin -related
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL07-18-J01At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL05-07-J06At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12 ,EC:1.2.1.9
glyceraldehyde-3-phosphate dehydrogenase
glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase
   Cluster:1-2 51693944500.02285220.365635216
      RAFL05-13-B09At5g03300 / pfkB type carbohydrate kinase protein family
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL04-09-G20At2g21170 / triosephosphate isomerase, chloroplast, putative
     
EC:5.3.1.1
triose-phosphate isomerase
      RAFL07-12-L15At1g12000 / pyrophosphate-fructose-6-phosphate 1-phosphotransferase -related
     
EC:2.7.1.90 ,EC:2.7.1.11
6-phosphofructokinase
unknown
      RAFL07-15-F22At1g20950 / pyrophosphate-dependent phosphofructokinase alpha subunit -related
     
EC:2.7.1.90 ,EC:2.7.1.11
6-phosphofructokinase
unknown
      RAFL06-13-M02At1g13440 / glyceraldehyde-3-phosphate dehydrogenase -related
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
glyceraldehyde 3-phosphate degradation ABCDPP'N
   Cluster:0-1 8981645412.9754789E-83.8681225E-713
      RAFL09-15-L04At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-14-L16At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-07-I23At1g56190 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL04-09-D24At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL07-16-P05At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL09-18-L22At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL04-15-A14At1g12900 / calcium-binding protein, calreticulin -related
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL05-07-J06At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
alanine biosynthesis II ABCDPP'N
   Cluster:2-1 3241444150.00423357360.0169342944
      RAFL09-09-I19At1g23310 / alanine aminotransferase -related
     
EC:2.6.1.2
alanine transaminase
      RAFL09-16-K01At1g23310 / alanine aminotransferase -related
     
EC:2.6.1.2
alanine transaminase
      RAFL05-07-N11At1g70580 / alanine aminotransferase, putative
     
EC:2.6.1.2
alanine transaminase
   Cluster:1-2 2172544840.0256931690.1027726754
      RAFL05-14-F03At1g23310 / alanine aminotransferase -related
     
EC:2.6.1.2
alanine transaminase
      RAFL07-12-E03At1g23310 / alanine aminotransferase -related
     
EC:2.6.1.2
alanine transaminase
methylglyoxal pathway ABCDPP'N
   Cluster:5-1 2280443770.0464899240.232449645
      RAFL08-16-B22At1g11840 / glyoxalase I, putative (lactoylglutathione lyase)
     
EC:4.4.1.5
4-hydroxyphenylpyruvate dioxygenase
      RAFL09-07-G14At1g67280 / glyoxalase I, putative (lactoylglutathione lyase)
     
EC:4.4.1.5
4-hydroxyphenylpyruvate dioxygenase
carotenoid biosynthesis ABCDPP'N
   Cluster:0-2 178045840.0169418830.0169418831
      RAFL07-12-F08At5g17230 / phytoene synthase (geranylgeranyl-diphosphate geranylgeranyl transferase)(PSY)
     
EC:2.5.1.32
geranylgeranyl-diphosphate geranylgeranyltransferase
dissimilatory sulfate reduction ABCDPP'N
   Cluster:2-2 251546050.00256677070.0154006246
      RAFL07-10-P11At3g22890 / ATP sulfurylase -related
     
EC:2.7.7.4
ATP sulfurylase
      RAFL07-12-E10At3g22890 / ATP sulfurylase -related
     
EC:2.7.7.4
ATP sulfurylase
vitamin E biosynthesis ABCDPP'N
   Cluster:9-1 294445630.0059619560.0238478244
      RAFL11-09-O05At1g06570 / 4-hydroxyphenylpyruvate dioxygenase (HPD)
     
EC:1.13.11.27
4-hydroxyphenylpyruvate dioxygenase
      RAFL11-12-C18At1g06570 / 4-hydroxyphenylpyruvate dioxygenase (HPD)
     
EC:1.13.11.27
4-hydroxyphenylpyruvate dioxygenase
   Cluster:9-0 131546260.040496570.161986284
      RAFL05-14-F20At1g06570 / 4-hydroxyphenylpyruvate dioxygenase (HPD)
     
EC:1.13.11.27
4-hydroxyphenylpyruvate dioxygenase
   Cluster:5-1 2280443770.0464899240.18595974
      RAFL08-16-B22At1g11840 / glyoxalase I, putative (lactoylglutathione lyase)
     
EC:1.13.11.27
4-hydroxyphenylpyruvate dioxygenase
      RAFL09-07-G14At1g67280 / glyoxalase I, putative (lactoylglutathione lyase)
     
EC:1.13.11.27
4-hydroxyphenylpyruvate dioxygenase
ascorbate biosynthesis ABCDPP'N
   Cluster:3-1 3213144463.7887847E-47.5775693E-42
      RAFL08-14-D02At2g39770 / GDP-mannose pyrophosphorylase
     
EC:2.7.7.13
GDP-D-mannose pyrophosphorylase
      RAFL08-13-A07At2g45790 / phosphomannomutase -related
     
EC:5.4.2.8
phosphomannomutase
      RAFL04-15-P16At5g28840 / NAD-dependent epimerase/dehydratase family
     
EC:5.1.3.18
GDP-D-mannose-3,5-epimerase
   Cluster:2-2 152346070.0447091650.089418332
      RAFL09-13-E08At2g39770 / GDP-mannose pyrophosphorylase
     
EC:2.7.7.13
GDP-D-mannose pyrophosphorylase
TCA cycle variation II ABCDPP'N
   Cluster:3-0 5228444263.1898064E-51.5949032E-45
      RAFL07-17-M04At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL06-07-J21At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL05-21-P13At2g42600 / phosphoenolpyruvate carboxylase
     
EC:4.1.1.31
phosphoenolpyruvate carboxylase
      RAFL09-09-M02At3g47520 / malate dehydrogenase (NAD), chloroplast, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL07-14-B18At2g47510 / fumarase -related
     
EC:4.2.1.2
adenylosuccinate lyase
phenylpropanoid pathway, initial reactions ABCDPP'N
   Cluster:6-2 3173344849.720464E-40.00388818564
      RAFL09-11-L22At3g53260 / phenylalanine ammonia-lyase (PAL2)
     
EC:4.3.1.5
phenylalanine ammonia-lyase
      RAFL04-13-B02At2g37040 / phenylalanine ammonia lyase (PAL1)
     
EC:4.3.1.5
phenylalanine ammonia-lyase
      RAFL04-16-D08At3g53260 / phenylalanine ammonia-lyase (PAL2)
     
EC:4.3.1.5
phenylalanine ammonia-lyase
fatty acid elongation -- saturated ABCDPP'N
   Cluster:6-2 2174744800.0428263950.342611168
      RAFL05-10-D10At5g43760 / beta-ketoacyl-CoA synthase, putative
     
EC:2.3.1.41
3-oxoacyl-[acyl-carrier protein] synthase
      RAFL02-03-L07At2g26250 / beta-ketoacyl-CoA synthase family (FIDDLEHEAD) (FDH)
     
EC:2.3.1.41
3-oxoacyl-[acyl-carrier protein] synthase
ribitol degradation ABCDPP'N
   Cluster:3-0 2231144290.0072133320.0144266642
      RAFL05-21-O08At5g61410 / ribulose-5-phosphate-3-epimerase
     
EC:5.1.3.1
ribulose-phosphate 3-epimerase
      RAFL11-02-F16At3g01850 / D-ribulose-5-phosphate 3-epimerase -related
     
EC:5.1.3.1
ribulose-phosphate 3-epimerase
respiration (anaerobic)-- electron donors reaction list ABCDPP'N
   Cluster:4-1 5305743466.7494786E-40.00337473965
      RAFL05-04-N24At3g18410 / expressed protein
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL11-02-J20At3g12260 / expressed protein
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL09-10-O11At3g12260 / expressed protein
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL09-18-I01At5g08530 / NADH-ubiquinone oxidoreductase (mitochondrial), putative
     
EC:1.6.5.3 ,EC:1.18.99.1
NADH dehydrogenase (ubiquinone)
      RAFL06-08-D19At5g37510 / NADH dehydrogenase (ubiquinone), mitochondrial, putative
     
EC:1.2.1.2 ,EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
formate dehydrogenase
   Cluster:6-1 3312943390.0425574520.212787275
      RAFL06-10-E05At1g16700 / NADH:ubiquinone oxidoreductase -related
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL05-08-F21At3g03100 / expressed protein
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL07-07-N09At5g37510 / NADH dehydrogenase (ubiquinone), mitochondrial, putative
     
EC:1.2.1.2 ,EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
formate dehydrogenase
   Cluster:6-0 21381045130.0485075670.242537845
      RAFL08-12-A05At5g11770 / NADH dehydrogenase (ubiquinone)
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL05-17-L16At1g79010 / NADH dehydrogenase -related
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
sorbitol degradation ABCDPP'N
   Cluster:0-1 799745507.745682E-93.8728412E-85
      RAFL07-18-C20At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL08-18-C10At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-12-E12At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-12-M09At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL04-19-O21At4g38970 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-17-N23At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-18-J01At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
   Cluster:1-2 31711144780.0137206860.0686034265
      RAFL05-13-B09At5g03300 / pfkB type carbohydrate kinase protein family
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL07-12-L15At1g12000 / pyrophosphate-fructose-6-phosphate 1-phosphotransferase -related
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL07-15-F22At1g20950 / pyrophosphate-dependent phosphofructokinase alpha subunit -related
     
EC:2.7.1.11
6-phosphofructokinase
(deoxy)ribose phosphate degradation ABCDPP'N
   Cluster:0-2 178145830.033600310.067200622
      RAFL07-12-I18At2g45290 / transketolase precursor -related
     
EC:2.2.1.1
transketolase
non-phosphorylated glucose degradation ABCDPP'N
   Cluster:9-0 4281346184.0860064E-64.0860064E-510
      RAFL05-21-E06At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
      RAFL04-09-D07At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
      RAFL08-15-L09At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
      RAFL08-09-C23At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
   Cluster:3-1 42121344340.0066169240.0661692410
      RAFL05-11-L02At4g25900 / aldose 1-epimerase family
     
EC:5.1.3.3
aldose 1-epimerase
      RAFL05-21-G03At3g22960 / pyruvate kinase, putative
     
EC:2.7.1.40
pyruvate kinase
      RAFL04-13-O10At2g29560 / enolase (2-phospho-D-glycerate hydroylase) -related
     
EC:4.2.1.11
phosphopyruvate hydratase
      RAFL09-12-D13At5g52920 / pyruvate kinase, putative
     
EC:2.7.1.40
pyruvate kinase
glycerol metabolism ABCDPP'N
   Cluster:8-2 161245990.03936880.11810643
      RAFL06-11-H07At1g80460 / glycerol kinase -related
     
EC:2.7.1.30
glycerol kinase
colanic acid building blocks biosynthesis ABCDPP'N
   Cluster:3-2 2352246040.0151518270.227277415
      RAFL09-16-F08At3g23820 / NAD-dependent epimerase/dehydratase family
     
EC:4.2.1.47 ,EC:5.1.3.2
UDP-glucose 4-epimerase
3-beta-hydroxy-delta5-steroid dehydrogenase
      RAFL09-07-D12At3g23820 / NAD-dependent epimerase/dehydratase family
     
EC:4.2.1.47 ,EC:5.1.3.2
UDP-glucose 4-epimerase
3-beta-hydroxy-delta5-steroid dehydrogenase
isoleucine biosynthesis I ABCDPP'N
   Cluster:4-0 2238544180.0466700570.233350295
      RAFL06-16-L13At5g54960 / pyruvate decarboxylase (gb|AAB16855.1)
     
EC:4.1.3.18
acetolactate synthase
      RAFL09-18-P18At3g48560 / acetolactate synthase
     
EC:4.1.3.18
acetolactate synthase
   Cluster:2-1 2242544140.048101910.240509545
      RAFL02-01-G08At3g58610 / ketol-acid reductoisomerase
     
EC:1.1.1.86
ketol-acid reductoisomerase
      RAFL04-13-D06At3g23940 / dihydroxyacid dehydratase -related
     
EC:4.2.1.9
unknown
lysine biosynthesis I ABCDPP'N
   Cluster:2-1 2242344160.0245507420.0982029664
      RAFL06-12-N06At3g53580 / diaminopimelate epimerase - like protein
     
EC:5.1.1.7
diaminopimelate epimerase
      RAFL06-15-B04At1g14810 / aspartate-semialdehyde dehydrogenase -related
     
EC:1.2.1.11
aspartate-semialdehyde dehydrogenase
glycine degradation I ABCDPP'N
   Cluster:0-2 772545792.2650871E-101.1325436E-95
      RAFL11-06-P03At4g33010 / glycine dehydrogenase (decarboxylating) (glycine decarboxylase/glycine cleavage system P-protein), putative
     
EC:1.4.4.2
glycine dehydrogenase (decarboxylating)
      RAFL07-10-O06At4g33010 / glycine dehydrogenase (decarboxylating) (glycine decarboxylase/glycine cleavage system P-protein), putative
     
EC:1.4.4.2
glycine dehydrogenase (decarboxylating)
      RAFL09-06-E16At2g26080 / glycine dehydrogenase (decarboxylating) (glycine decarboxylase/glycine cleavage system P-protein), putative
     
EC:1.4.4.2
glycine dehydrogenase (decarboxylating)
      RAFL08-11-O04At4g33010 / glycine dehydrogenase (decarboxylating) (glycine decarboxylase/glycine cleavage system P-protein), putative
     
EC:1.4.4.2
glycine dehydrogenase (decarboxylating)
      RAFL11-06-F06At4g33010 / glycine dehydrogenase (decarboxylating) (glycine decarboxylase/glycine cleavage system P-protein), putative
     
EC:1.4.4.2
glycine dehydrogenase (decarboxylating)
      RAFL07-18-E18At4g33010 / glycine dehydrogenase (decarboxylating) (glycine decarboxylase/glycine cleavage system P-protein), putative
     
EC:1.4.4.2
glycine dehydrogenase (decarboxylating)
      RAFL09-09-C13At4g33010 / glycine dehydrogenase (decarboxylating) (glycine decarboxylase/glycine cleavage system P-protein), putative
     
EC:1.4.4.2
glycine dehydrogenase (decarboxylating)
   Cluster:0-1 21041045470.0291225370.145612695
      RAFL06-13-H16At1g11860 / aminomethyltransferase-related precursor protein
     
EC:2.1.2.10
aminomethyltransferase
      RAFL05-04-M03At1g32470 / glycine cleavage system H protein precursor -related
     
EC:1.4.4.2
glycine dehydrogenase (decarboxylating)
cysteine biosynthesis II ABCDPP'N
   Cluster:3-1 2214044470.00213626210.00213626211
      RAFL04-10-L08At4g34200 / D-3-phosphoglycerate dehydrogenase (3-PGDH), putative
     
EC:1.1.1.95
phosphoglycerate dehydrogenase
      RAFL04-18-D17At4g35630 / phosphoserine aminotransferase
     
EC:2.6.1.52
triacylglycerol lipase
phenylalanine degradation I ABCDPP'N
   Cluster:3-0 52281544150.00249385950.02743245511
      RAFL07-17-M04At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL06-07-J21At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL05-21-P13At2g42600 / phosphoenolpyruvate carboxylase
     
EC:4.1.1.32
phosphoenolpyruvate carboxykinase
      RAFL09-09-M02At3g47520 / malate dehydrogenase (NAD), chloroplast, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL07-14-B18At2g47510 / fumarase -related
     
EC:4.2.1.2
adenylosuccinate lyase
aspartate biosynthesis and degradation ABCDPP'N
   Cluster:6-1 2313243460.0249164940.0747494853
      RAFL04-17-L05At5g19550 / aspartate aminotransferase, cytoplasmic isozyme 1 (transaminase A/Asp2)
     
EC:2.6.1.1
1-aminocyclopropane-1-carboxylate synthase
      RAFL11-09-A12At5g19550 / aspartate aminotransferase, cytoplasmic isozyme 1 (transaminase A/Asp2)
     
EC:2.6.1.1
1-aminocyclopropane-1-carboxylate synthase
proline biosynthesis I ABCDPP'N
   Cluster:9-0 428546262.2481943E-71.1240971E-65
      RAFL05-21-E06At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.41
1-pyrroline-5-carboxylate dehydrogenase
      RAFL04-09-D07At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.41
1-pyrroline-5-carboxylate dehydrogenase
      RAFL08-15-L09At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.41
1-pyrroline-5-carboxylate dehydrogenase
      RAFL08-09-C23At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.41
1-pyrroline-5-carboxylate dehydrogenase
fructose degradation (anaerobic) ABCDPP'N
   Cluster:0-1 15912945281.08628985E-141.6294348E-1315
      RAFL07-18-C20At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-15-L04At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-14-L16At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL08-18-C10At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-12-E12At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-07-I23At1g56190 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-12-M09At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL04-09-D24At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL07-16-P05At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL09-18-L22At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL04-19-O21At4g38970 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-17-N23At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL04-15-A14At1g12900 / calcium-binding protein, calreticulin -related
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL07-18-J01At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL05-07-J06At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
   Cluster:1-2 51693944500.02285220.3427829715
      RAFL05-13-B09At5g03300 / pfkB type carbohydrate kinase protein family
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL04-09-G20At2g21170 / triosephosphate isomerase, chloroplast, putative
     
EC:5.3.1.1
triose-phosphate isomerase
      RAFL07-12-L15At1g12000 / pyrophosphate-fructose-6-phosphate 1-phosphotransferase -related
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL07-15-F22At1g20950 / pyrophosphate-dependent phosphofructokinase alpha subunit -related
     
EC:2.7.1.11
6-phosphofructokinase
      RAFL06-13-M02At1g13440 / glyceraldehyde-3-phosphate dehydrogenase -related
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
alanine degradation III ABCDPP'N
   Cluster:2-1 3241444150.00423357360.0169342944
      RAFL09-09-I19At1g23310 / alanine aminotransferase -related
     
EC:2.6.1.2
alanine transaminase
      RAFL09-16-K01At1g23310 / alanine aminotransferase -related
     
EC:2.6.1.2
alanine transaminase
      RAFL05-07-N11At1g70580 / alanine aminotransferase, putative
     
EC:2.6.1.2
alanine transaminase
   Cluster:1-2 2172544840.0256931690.1027726754
      RAFL05-14-F03At1g23310 / alanine aminotransferase -related
     
EC:2.6.1.2
alanine transaminase
      RAFL07-12-E03At1g23310 / alanine aminotransferase -related
     
EC:2.6.1.2
alanine transaminase
serine-isocitrate lyase pathway ABCDPP'N
   Cluster:3-0 72262444066.6646485E-40.01199636718
      RAFL07-17-M04At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL05-10-L06At2g13360 / alanine-glyoxylate aminotransferase
     
EC:2.6.1.45
unknown
      RAFL06-07-J21At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL05-21-P13At2g42600 / phosphoenolpyruvate carboxylase
     
EC:4.1.1.31
phosphoenolpyruvate carboxylase
      RAFL09-09-M02At3g47520 / malate dehydrogenase (NAD), chloroplast, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL05-18-J16At2g13360 / alanine-glyoxylate aminotransferase
     
EC:2.6.1.45
unknown
      RAFL05-02-A17At4g32520 / glycine hydroxymethyltransferase (EC 2.1.2.1) - like protein
     
EC:2.1.2.1
glycine hydroxymethyltransferase
trehalose biosynthesis I ABCDPP'N
   Cluster:10-1 142346170.036390580.145562324
      RAFL05-13-B06At2g18700 / glycosyltransferase family 20
     
EC:2.4.1.15
alpha,alpha-trehalose-phosphate synthase (UDP-forming)
superpathway of serine and glycine biosynthesis II ABCDPP'N
   Cluster:1-2 31711344760.0199860690.179874639
      RAFL05-14-F03At1g23310 / alanine aminotransferase -related
     
EC:2.6.1.4
alanine transaminase
      RAFL09-11-K06At4g13930 / hydroxymethyltransferase
     
EC:2.1.2.1
glycine hydroxymethyltransferase
      RAFL07-12-E03At1g23310 / alanine aminotransferase -related
     
EC:2.6.1.4
alanine transaminase
   Cluster:3-0 32301344170.042579050.383211439
      RAFL05-10-L06At2g13360 / alanine-glyoxylate aminotransferase
     
EC:2.6.1.4
alanine transaminase
      RAFL05-18-J16At2g13360 / alanine-glyoxylate aminotransferase
     
EC:2.6.1.4
alanine transaminase
      RAFL05-02-A17At4g32520 / glycine hydroxymethyltransferase (EC 2.1.2.1) - like protein
     
EC:2.1.2.1
glycine hydroxymethyltransferase
   Cluster:2-1 32411344060.047808890.430289
      RAFL09-09-I19At1g23310 / alanine aminotransferase -related
     
EC:2.6.1.4
alanine transaminase
      RAFL09-16-K01At1g23310 / alanine aminotransferase -related
     
EC:2.6.1.4
alanine transaminase
      RAFL05-07-N11At1g70580 / alanine aminotransferase, putative
     
EC:2.6.1.4
alanine transaminase
fatty acid oxidation pathway II ABCDPP'N
   Cluster:9-0 428246292.7153972E-88.146192E-83
      RAFL05-21-E06At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
      RAFL04-09-D07At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
      RAFL08-15-L09At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
      RAFL08-09-C23At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
arginine degradation III ABCDPP'N
   Cluster:9-2 265845880.0084968440.067974758
      RAFL09-13-D07At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
      RAFL08-11-N01At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
   Cluster:10-2 2107845460.0215566460.172453178
      RAFL08-15-A08At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
      RAFL04-13-O07At3g22200 / 4-aminobutyrate aminotransferase (gamma-amino-N-butyrate transaminase/GABA transaminase/beta-alanine--oxoglutarate aminotransferase)
     
EC:2.6.1.19
4-aminobutyrate transaminase
tryptophan degradation III ABCDPP'N
   Cluster:3-1 1215044470.046322110.046322111
      RAFL08-11-A03At5g48230 / acetyl-CoA C-acetyltransferase (acetoacetyl-coenzyme A thiolase), putative
     
EC:2.3.1.9
acetyl-CoA C-acetyltransferase
lignin biosynthesis ABCDPP'N
   Cluster:9-0 3291846133.591211E-40.00430945312
      RAFL05-18-A06At1g09500 / cinnamyl-alcohol dehydrogenase (CAD) family
     
EC:1.1.1.195
cinnamyl alcohol dehydrogenase
      RAFL06-15-H16At1g09500 / cinnamyl-alcohol dehydrogenase (CAD) family
     
EC:1.1.1.195
cinnamyl alcohol dehydrogenase
      RAFL05-14-E15At2g33590 / cinnamoyl-CoA reductase family
     
EC:1.2.1.44
cinnamoyl coenzyme A reductase
   Cluster:6-2 41721744700.00709277070.0851132512
      RAFL09-11-L22At3g53260 / phenylalanine ammonia-lyase (PAL2)
     
EC:4.3.1.5
phenylalanine ammonia-lyase
      RAFL04-13-B02At2g37040 / phenylalanine ammonia lyase (PAL1)
     
EC:4.3.1.5
phenylalanine ammonia-lyase
      RAFL04-16-D08At3g53260 / phenylalanine ammonia-lyase (PAL2)
     
EC:4.3.1.5
phenylalanine ammonia-lyase
      RAFL04-17-C19At4g34050 / caffeoyl-CoA 3-O-methyltransferase
     
EC:2.1.1.104
caffeoyl-CoA O-methyltransferase
polyamine biosynthesis I ABCDPP'N
   Cluster:9-2 265945870.0102892720.082314188
      RAFL09-13-D07At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
      RAFL08-11-N01At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
   Cluster:10-2 2107945450.0259496220.207596978
      RAFL05-15-A16At5g53120 / spermidine synthase
     
EC:2.5.1.16
spermidine synthase
      RAFL08-15-A08At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
tyrosine degradation ABCDPP'N
   Cluster:9-1 2941045570.0242063780.193651028
      RAFL11-09-O05At1g06570 / 4-hydroxyphenylpyruvate dioxygenase (HPD)
     
EC:1.13.11.27
4-hydroxyphenylpyruvate dioxygenase
      RAFL11-12-C18At1g06570 / 4-hydroxyphenylpyruvate dioxygenase (HPD)
     
EC:1.13.11.27
4-hydroxyphenylpyruvate dioxygenase
   Cluster:8-0 21071045440.030670750.2453668
      RAFL07-10-M07At5g53970 / aminotransferase, putative
     
EC:2.6.1.5
tyrosine transaminase
      RAFL05-09-B02At5g53970 / aminotransferase, putative
     
EC:2.6.1.5
tyrosine transaminase
   Cluster:5-1 3279943720.032024540.256196328
      RAFL08-16-B22At1g11840 / glyoxalase I, putative (lactoylglutathione lyase)
     
EC:1.13.11.27
4-hydroxyphenylpyruvate dioxygenase
      RAFL09-07-G14At1g67280 / glyoxalase I, putative (lactoylglutathione lyase)
     
EC:1.13.11.27
4-hydroxyphenylpyruvate dioxygenase
      RAFL05-14-M18At1g12050 / fumarylacetoacetate hydrolase-related protein
     
EC:3.7.1.2
fumarylacetoacetase
spermine biosynthesis I ABCDPP'N
   Cluster:9-2 265945870.0102892720.082314188
      RAFL09-13-D07At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
      RAFL08-11-N01At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
   Cluster:10-2 2107945450.0259496220.207596978
      RAFL05-15-A16At5g53120 / spermidine synthase
     
EC:2.5.1.16
spermidine synthase
      RAFL08-15-A08At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
acrylonitrile degradation ABCDPP'N
   Cluster:8-2 161245990.03936880.11810643
      RAFL02-08-C20At4g08790 / nitrilase 1 like protein
     
EC:4.2.1.84
hydrolase, acting on carbon-nitrogen (but not peptide) bonds
jasmonic acid biosynthesis ABCDPP'N
   Cluster:2-2 251746030.00433648470.0346918788
      RAFL05-12-G03At5g42650 / allene oxide synthase / cytochrome P450 74A
     
EC:4.2.1.92
allene oxide synthase
      RAFL06-10-H13At5g42650 / allene oxide synthase / cytochrome P450 74A
     
EC:4.2.1.92
allene oxide synthase
dTDP-rhamnose biosynthesis ABCDPP'N
   Cluster:3-2 235746190.00212977430.0127786466
      RAFL09-16-F08At3g23820 / NAD-dependent epimerase/dehydratase family
     
EC:4.2.1.46
dTDP-glucose 4,6-dehydratase
      RAFL09-07-D12At3g23820 / NAD-dependent epimerase/dehydratase family
     
EC:4.2.1.46
dTDP-glucose 4,6-dehydratase
   Cluster:5-2 2124745300.0230298730.138179246
      RAFL04-09-G05At1g50450 / expressed protein
     
EC:4.2.1.46
dTDP-glucose 4,6-dehydratase
      RAFL07-11-C21At4g30440 / nucleotide sugar epimerase family
     
EC:4.2.1.46
dTDP-glucose 4,6-dehydratase
serine biosynthesis ABCDPP'N
   Cluster:3-1 2214044470.00213626210.00213626211
      RAFL04-10-L08At4g34200 / D-3-phosphoglycerate dehydrogenase (3-PGDH), putative
     
EC:1.1.1.95
phosphoglycerate dehydrogenase
      RAFL04-18-D17At4g35630 / phosphoserine aminotransferase
     
EC:2.6.1.52
triacylglycerol lipase
sucrose degradation III ABCDPP'N
   Cluster:9-0 2301746140.00725469740.09431106613
      RAFL05-18-M07At4g02280 / sucrose synthase (UDP-glucose-fructose glucosyltransferase/sucrose-UDP glucosyltransferase), putative
     
EC:2.4.1.13
UDP-glycosyltransferase
      RAFL08-10-G22At4g02280 / sucrose synthase (UDP-glucose-fructose glucosyltransferase/sucrose-UDP glucosyltransferase), putative
     
EC:2.4.1.13
UDP-glycosyltransferase
   Cluster:10-2 31061645380.0091661590.1191600613
      RAFL05-07-J05At3g43190 / sucrose synthase (UDP-glucose-fructose glucosyltransferase/sucrose-UDP glucosyltransferase), putative
     
EC:2.4.1.13
UDP-glycosyltransferase
      RAFL08-15-K01At1g62660 / glycosyl hydrolase family 32
     
EC:3.2.1.26
unknown
      RAFL08-13-K06At1g62660 / glycosyl hydrolase family 32
     
EC:3.2.1.26
unknown
asparagine degradation I ABCDPP'N
   Cluster:3-0 3230344270.00220163330.00660489973
      RAFL05-21-P13At2g42600 / phosphoenolpyruvate carboxylase
     
EC:4.1.1.32
phosphoenolpyruvate carboxylase
      RAFL09-07-B08At2g30970 / aspartate aminotransferase, mitochondrial (transaminase A/Asp1)
     
EC:2.6.1.1
1-aminocyclopropane-1-carboxylate synthase
      RAFL04-20-H11At5g08100 / asparaginase
     
EC:3.5.1.1
asparaginase
glutamine biosynthesis I ABCDPP'N
   Cluster:9-2 265245940.00119790770.00359372333
      RAFL08-17-D17At3g53180 / nodulin / glutamate-ammonia ligase - like protein
     
EC:6.3.1.2
glutamate-ammonia ligase
      RAFL06-09-F14At3g53180 / nodulin / glutamate-ammonia ligase - like protein
     
EC:6.3.1.2
glutamate-ammonia ligase
   Cluster:2-2 152346070.0447091650.134127483
      RAFL04-16-N11At5g35630 / glutamate-ammonia ligase (EC 6.3.1.2) precursor, chloroplast (clone lambdaAtgsl1) (pir||S18600)
     
EC:6.3.1.2
glutamate-ammonia ligase
arginine degradation V ABCDPP'N
   Cluster:9-2 265845880.0084968440.067974758
      RAFL09-13-D07At4g34710 / arginine decarboxylase SPE2
     
EC:1.13.12.1
arginine decarboxylase
      RAFL08-11-N01At4g34710 / arginine decarboxylase SPE2
     
EC:1.13.12.1
arginine decarboxylase
   Cluster:10-2 2107845460.0215566460.172453178
      RAFL08-15-A08At4g34710 / arginine decarboxylase SPE2
     
EC:1.13.12.1
arginine decarboxylase
      RAFL04-13-O07At3g22200 / 4-aminobutyrate aminotransferase (gamma-amino-N-butyrate transaminase/GABA transaminase/beta-alanine--oxoglutarate aminotransferase)
     
EC:2.6.1.19
4-aminobutyrate transaminase//alanine-glyoxylate transaminase
threonine degradation ABCDPP'N
   Cluster:4-0 3237744160.0123404630.074042786
      RAFL04-17-J20At1g49670 / oxidoreductase, zinc-binding dehydrogenase family
     
EC:1.1.1.103
L-threonine 3-dehydrogenase//alcohol dehydrogenase, zinc-dependent
      RAFL05-19-C06At3g56460 / oxidoreductase, zinc-binding dehydrogenase family
     
EC:1.1.1.103
L-threonine 3-dehydrogenase//alcohol dehydrogenase, zinc-dependent
      RAFL04-18-H23At1g08110 / glyoxalase I, putative (lactoylglutathione lyase)
     
EC:4.4.1.5
4-hydroxyphenylpyruvate dioxygenase
   Cluster:8-0 2107845460.0215566460.129339876
      RAFL05-21-N06At4g13010 / oxidoreductase, zinc-binding dehydrogenase family
     
EC:1.1.1.103
L-threonine 3-dehydrogenase//alcohol dehydrogenase, zinc-dependent
      RAFL09-09-E18At2g32090 / glyoxalase family protein (lactoylglutathione lyase family protein)
     
EC:4.4.1.5
4-hydroxyphenylpyruvate dioxygenase
4-hydroxyproline degradation ABCDPP'N
   Cluster:9-0 428846238.7054286E-77.834886E-69
      RAFL05-21-E06At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
      RAFL04-09-D07At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
      RAFL08-15-L09At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
      RAFL08-09-C23At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
glutamate degradation I ABCDPP'N
   Cluster:9-0 131546260.040496570.24297946
      RAFL05-08-B14At2g38400 / alanine--glyoxylate aminotransferase (beta-alanine-pyruvate aminotransferase/AGT), putative
     
EC:2.6.1.19
4-aminobutyrate transaminase//alanine-glyoxylate transaminase
de novo biosynthesis of purine nucleotides II ABCDPP'N
   Cluster:3-0 2231544250.0442061420.22103075
      RAFL07-14-B18At2g47510 / fumarase -related
     
EC:4.3.2.2
adenylosuccinate lyase
      RAFL05-15-O22At2g20420 / succinyl-CoA ligase beta subunit
     
EC:6.3.4.13
phosphoribosylamine-glycine ligase
   Cluster:2-1 2242544140.048101910.240509545
      RAFL04-17-H07At3g57610 / adenylosuccinate synthetase
     
EC:6.3.4.4
adenylosuccinate synthase
      RAFL04-12-O11At3g27740 / carbamoyl-phosphate synthase (glutamine-hydrolyzing) (glutamine-dependent carbamoyl-phosphate synthase) small subunit
     
EC:6.3.5.2
GMP synthase (glutamine-hydrolyzing)
proline degradation I ABCDPP'N
   Cluster:9-0 428846238.7054286E-77.834886E-69
      RAFL05-21-E06At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
      RAFL04-09-D07At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
      RAFL08-15-L09At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
      RAFL08-09-C23At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
arginine degradation VIII ABCDPP'N
   Cluster:4-1 2308243510.0241664610.072499383
      RAFL05-09-P07At4g29120 / expressed protein
     
EC:1.5.1.2
disulfide oxidoreductase
      RAFL06-14-H08At5g14800 / pyrroline-5-carboxylate reductase
     
EC:1.5.1.2
disulfide oxidoreductase
histidine biosynthesis I ABCDPP'N
   Cluster:8-0 2107645480.0138281590.0967971167
      RAFL07-10-M07At5g53970 / aminotransferase, putative
     
EC:2.6.1.9
histidinol-phosphate transaminase
      RAFL05-09-B02At5g53970 / aminotransferase, putative
     
EC:2.6.1.9
histidinol-phosphate transaminase
glycosylglyceride biosynthesis ABCDPP'N
   Cluster:8-2 161245990.03936880.11810643
      RAFL04-20-J18At4g31780 / 1,2-diacylglycerol 3-beta-galactosyltransferase (UDP-galactose:diacylglycerol galactosyltransferase) (MGDG synthase) (MGD1), putative
     
EC:2.4.1.46
UDP-galactose:DAG galactosyltransferase
polyamine biosynthesis III ABCDPP'N
   Cluster:9-2 265845880.0084968440.0594779077
      RAFL09-13-D07At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
      RAFL08-11-N01At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
   Cluster:10-2 2107845460.0215566460.150896527
      RAFL05-15-A16At5g53120 / spermidine synthase
     
EC:2.5.1.16
spermidine synthase
      RAFL08-15-A08At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
   Cluster:8-1 2160844930.0449447040.314612937
      RAFL04-17-I02At2g16500 / arginine decarboxylase
     
EC:4.1.1.19
arginine decarboxylase
      RAFL05-09-J16At5g53120 / spermidine synthase
     
EC:2.5.1.16
spermidine synthase
phenylalanine biosynthesis II ABCDPP'N
   Cluster:8-0 2107445500.0076380840.0381904175
      RAFL07-10-M07At5g53970 / aminotransferase, putative
     
EC:2.6.1.5 ,EC:2.6.1.9
1-aminocyclopropane-1-carboxylate synthase
phosphoglycerate dehydrogenase
      RAFL05-09-B02At5g53970 / aminotransferase, putative
     
EC:2.6.1.5 ,EC:2.6.1.9
1-aminocyclopropane-1-carboxylate synthase
phosphoglycerate dehydrogenase
glyoxylate cycle ABCDPP'N
   Cluster:3-0 32301144190.0297787280.32756611
      RAFL07-17-M04At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL06-07-J21At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL09-09-M02At3g47520 / malate dehydrogenase (NAD), chloroplast, putative
     
EC:1.1.1.37
malate dehydrogenase
polyamine biosynthesis II ABCDPP'N
   Cluster:9-2 265845880.0084968440.0594779077
      RAFL09-13-D07At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
      RAFL08-11-N01At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
   Cluster:10-2 2107845460.0215566460.150896527
      RAFL05-15-A16At5g53120 / spermidine synthase
     
EC:2.5.1.16
spermidine synthase
      RAFL08-15-A08At4g34710 / arginine decarboxylase SPE2
     
EC:4.1.1.19
arginine decarboxylase
   Cluster:8-1 2160844930.0449447040.314612937
      RAFL04-17-I02At2g16500 / arginine decarboxylase
     
EC:4.1.1.19
arginine decarboxylase
      RAFL05-09-J16At5g53120 / spermidine synthase
     
EC:2.5.1.16
spermidine synthase
pyridoxal 5'-phosphate salvage pathway ABCDPP'N
   Cluster:4-2 1134045280.0289513190.0289513191
      RAFL05-16-L10At5g49970 / expressed protein
     
EC:1.4.3.5
pyridoxamine-phosphate oxidase
homocysteine and cysteine interconversion ABCDPP'N
   Cluster:9-1 294045674.1952432E-44.1952432E-41
      RAFL05-18-H15At1g64660 / methionine/cystathionine gamma lyase -related
     
EC:4.4.1.8
cystathionine beta-lyase
      RAFL11-02-N11At1g64660 / methionine/cystathionine gamma lyase -related
     
EC:4.4.1.8
cystathionine beta-lyase
methylglyoxal degradation ABCDPP'N
   Cluster:5-1 2280443770.0464899240.232449645
      RAFL08-16-B22At1g11840 / glyoxalase I, putative (lactoylglutathione lyase)
     
EC:4.4.1.5
4-hydroxyphenylpyruvate dioxygenase
      RAFL09-07-G14At1g67280 / glyoxalase I, putative (lactoylglutathione lyase)
     
EC:4.4.1.5
4-hydroxyphenylpyruvate dioxygenase
lactate oxidation ABCDPP'N
   Cluster:4-1 5305943440.0015270340.0122162728
      RAFL07-16-E16At3g13930 / acetyltransferase -related
     
EC:2.3.1.12
unknown
      RAFL06-08-D06At2g34590 / pyruvate dehydrogenase E1 beta subunit -related
     
EC:1.2.4.1
pyruvate decarboxylase
      RAFL09-12-A19At3g13930 / acetyltransferase -related
     
EC:2.3.1.12
unknown
      RAFL09-11-F09At1g30120 / pyruvate dehydrogenase E1 beta subunit -related
     
EC:1.2.4.1
pyruvate decarboxylase
      RAFL09-16-O16At1g01090 / pyruvate dehydrogenase E1 alpha subunit
     
EC:1.2.4.1
pyruvate decarboxylase
biosynthesis of proto- and siroheme ABCDPP'N
   Cluster:3-2 4331146154.3046944E-63.4437555E-58
      RAFL09-06-N12At3g23810 / S-adenosyl-L-homocysteinas -related
     
EC:4.3.1.8
adenosylhomocysteinase
      RAFL07-09-L01At3g23810 / S-adenosyl-L-homocysteinas -related
     
EC:4.3.1.8
adenosylhomocysteinase
      RAFL09-13-P13At3g23810 / S-adenosyl-L-homocysteinas -related
     
EC:4.3.1.8
adenosylhomocysteinase
      RAFL09-10-M18At3g23810 / S-adenosyl-L-homocysteinas -related
     
EC:4.3.1.8
adenosylhomocysteinase
   Cluster:2-1 32411244070.0403601640.32288138
      RAFL04-17-P12At4g13940 / adenosylhomocysteinase
     
EC:4.3.1.8
adenosylhomocysteinase
      RAFL05-10-J03At1g69740 / porphobilinogen synthase (delta-aminolevulinic acid dehydratase), putative
     
EC:4.2.1.24
porphobilinogen synthase
      RAFL04-15-N01At1g69740 / porphobilinogen synthase (delta-aminolevulinic acid dehydratase), putative
     
EC:4.2.1.24
porphobilinogen synthase
leucine degradation I ABCDPP'N
   Cluster:10-2 1108145530.04620950.0924192
      RAFL06-10-M04At2g26800 / hydroxymethylglutaryl-CoA lyase -related
     
EC:4.1.3.4
hydroxymethylglutaryl-CoA lyase
glycerol degradation II ABCDPP'N
   Cluster:0-1 8982445333.6590941E-75.4886414E-615
      RAFL09-15-L04At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-14-L16At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-07-I23At1g56190 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL04-09-D24At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL07-16-P05At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL09-18-L22At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL04-15-A14At1g12900 / calcium-binding protein, calreticulin -related
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
      RAFL05-07-J06At1g42970 / glyceraldehyde-3-phosphate dehydrogenase
     
EC:1.2.1.12
glyceraldehyde-3-phosphate dehydrogenase
   Cluster:3-1 62102644210.00303288250.04549323815
      RAFL07-10-P13At1g09780 / 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -related
     
EC:5.4.2.1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
      RAFL05-01-I24At3g55440 / triosephosphate isomerase, cytosolic, putative
     
EC:5.3.1.1
triose-phosphate isomerase
      RAFL05-21-G03At3g22960 / pyruvate kinase, putative
     
EC:2.7.1.40
pyruvate kinase
      RAFL04-13-O10At2g29560 / enolase (2-phospho-D-glycerate hydroylase) -related
     
EC:4.2.1.11
phosphopyruvate hydratase
      RAFL09-12-D13At5g52920 / pyruvate kinase, putative
     
EC:2.7.1.40
pyruvate kinase
      RAFL07-09-L18At2g40690 / glycerol-3-phosphate dehydrogenase
     
EC:1.1.1.8
glycerol-3-phosphate dehydrogenase (NAD+)
TCA cycle variation VIII ABCDPP'N
   Cluster:3-0 52282344070.0114106740.1939814517
      RAFL07-17-M04At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL06-07-J21At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL05-21-P13At2g42600 / phosphoenolpyruvate carboxylase
     
EC:4.1.1.32
phosphoenolpyruvate carboxykinase
      RAFL09-09-M02At3g47520 / malate dehydrogenase (NAD), chloroplast, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL07-14-B18At2g47510 / fumarase -related
     
EC:4.2.1.2
adenylosuccinate lyase
galactose degradation I ABCDPP'N
   Cluster:3-2 2351746090.0096238910.1347344714
      RAFL09-16-F08At3g23820 / NAD-dependent epimerase/dehydratase family
     
EC:5.1.3.2
UDP-glucose 4-epimerase
      RAFL09-07-D12At3g23820 / NAD-dependent epimerase/dehydratase family
     
EC:5.1.3.2
UDP-glucose 4-epimerase
UDP-N-acetylglucosamine biosynthesis ABCDPP'N
   Cluster:1-1 2103245560.00292587580.0087776283
      RAFL09-13-M20At1g31070 / UDP-N-acetylglucosamine pyrophosphorylase-related protein
     
EC:2.7.7.23
UDP-N-acetylglucosamine diphosphorylase
      RAFL09-18-H10At5g19220 / glucose-1-phosphate adenylyltransferase, large subunit 1, chloroplast (ADP-glucose pyrophosphorylase) (ADG2) (APL1)
     
EC:2.7.7.23
UDP-N-acetylglucosamine diphosphorylase
cyclopropane fatty acid (CFA) biosynthesis ABCDPP'N
   Cluster:2-1 2242144180.007899160.015798322
      RAFL07-08-E22At3g23530 / cyclopropane synthase, putative
     
EC:2.1.1.79
amine oxidase
      RAFL07-18-J07At3g23530 / cyclopropane synthase, putative
     
EC:2.1.1.79
amine oxidase
arginine biosynthesis I ABCDPP'N
   Cluster:3-1 4212244456.244364E-51.8733094E-43
      RAFL07-16-F16At3g20330 / aspartate carbamoyltransferase precursor (aspartate transcarbamylase)
     
EC:2.1.3.3
ornithine carbamoyltransferase
      RAFL07-18-A10At2g37500 / glutamate/ornithine acetyltransferase -related
     
EC:2.3.1.35 ,EC:2.3.1.1
glutamate N-acetyltransferase
acetylglutamate kinase
      RAFL07-08-L02At5g10920 / argininosuccinate lyase (AtArgH)
     
EC:4.3.2.1
adenylosuccinate lyase
      RAFL04-16-G24At1g80600 / acetylornithine aminotransferase, mitochondrial (acetylornithine transaminase/AOTA/ACOAT), putative
     
EC:2.6.1.11
acetylornithine transaminase
peptidoglycan biosynthesis ABCDPP'N
   Cluster:1-1 2103145570.00148477450.0029695492
      RAFL09-13-M20At1g31070 / UDP-N-acetylglucosamine pyrophosphorylase-related protein
     
EC:2.7.7.23
UDP-N-acetylglucosamine diphosphorylase
      RAFL09-18-H10At5g19220 / glucose-1-phosphate adenylyltransferase, large subunit 1, chloroplast (ADP-glucose pyrophosphorylase) (ADG2) (APL1)
     
EC:2.7.7.23
UDP-N-acetylglucosamine diphosphorylase
ammonia assimilation cycle ABCDPP'N
   Cluster:9-2 265245940.00119790770.00359372333
      RAFL08-17-D17At3g53180 / nodulin / glutamate-ammonia ligase - like protein
     
EC:6.3.1.2
glutamate-ammonia ligase
      RAFL06-09-F14At3g53180 / nodulin / glutamate-ammonia ligase - like protein
     
EC:6.3.1.2
glutamate-ammonia ligase
   Cluster:2-2 152346070.0447091650.134127483
      RAFL04-16-N11At5g35630 / glutamate-ammonia ligase (EC 6.3.1.2) precursor, chloroplast (clone lambdaAtgsl1) (pir||S18600)
     
EC:6.3.1.2
glutamate-ammonia ligase
homogalacturonan degradation ABCDPP'N
   Cluster:2-2 152146090.0226053690.0452107382
      RAFL06-10-O06At1g53840 / pectinesterase family
     
EC:3.1.1.11
pectin methylesterase
   Cluster:0-1 1105145560.0449523070.0899046142
      RAFL09-12-M04At3g14310 / pectin methylesterase -related
     
EC:3.1.1.11
pectin methylesterase
sucrose biosynthesis ABCDPP'N
   Cluster:9-0 2301046210.00288519120.025966729
      RAFL05-18-M07At4g02280 / sucrose synthase (UDP-glucose-fructose glucosyltransferase/sucrose-UDP glucosyltransferase), putative
     
EC:2.4.1.13
UDP-glycosyltransferase
      RAFL08-10-G22At4g02280 / sucrose synthase (UDP-glucose-fructose glucosyltransferase/sucrose-UDP glucosyltransferase), putative
     
EC:2.4.1.13
UDP-glycosyltransferase
   Cluster:4-1 3307943440.0408576350.367718739
      RAFL07-13-K21At2g35840 / expressed protein
     
EC:3.1.3.24
sucrose-phosphatase
      RAFL09-15-M21At5g17310 / UDP-glucose pyrophosphorylase
     
EC:2.7.7.9
UDP-N-acetylglucosamine diphosphorylase
      RAFL09-12-G22At5g17310 / UDP-glucose pyrophosphorylase
     
EC:2.7.7.9
UDP-N-acetylglucosamine diphosphorylase
UDP-glucose conversion ABCDPP'N
   Cluster:3-0 52282144090.00828316250.132530616
      RAFL07-11-P20At4g01480 / inorganic phosphatase -related
     
EC:3.6.1.1
unknown
      RAFL05-16-O24At4g35250 / vestitone reductase-related
     
EC:5.1.3.2
UDP-glucose 4-epimerase
      RAFL09-15-M18At3g03250 / UDP-glucose pyrophosphorylase -related
     
EC:2.7.7.9
UDP-N-acetylglucosamine diphosphorylase
      RAFL07-18-D08At1g15690 / inorganic pyrophosphatase -related
     
EC:3.6.1.1
unknown
      RAFL05-18-A12At1g15690 / inorganic pyrophosphatase -related
     
EC:3.6.1.1
unknown
   Cluster:3-2 2352446020.0176655560.282648916
      RAFL09-16-F08At3g23820 / NAD-dependent epimerase/dehydratase family
     
EC:5.1.3.2
UDP-glucose 4-epimerase
      RAFL09-07-D12At3g23820 / NAD-dependent epimerase/dehydratase family
     
EC:5.1.3.2
UDP-glucose 4-epimerase
fatty acid elongation -- unsaturated ABCDPP'N
   Cluster:6-2 2174644810.0341434740.239004337
      RAFL05-10-D10At5g43760 / beta-ketoacyl-CoA synthase, putative
     
EC:2.3.1.41
3-oxoacyl-[acyl-carrier protein] synthase
      RAFL02-03-L07At2g26250 / beta-ketoacyl-CoA synthase family (FIDDLEHEAD) (FDH)
     
EC:2.3.1.41
3-oxoacyl-[acyl-carrier protein] synthase
acetyl-CoA assimilation ABCDPP'N
   Cluster:3-0 52281644140.00314190910.0408448213
      RAFL07-17-M04At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL06-07-J21At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL05-21-P13At2g42600 / phosphoenolpyruvate carboxylase
     
EC:4.1.1.31
phosphoenolpyruvate carboxylase
      RAFL09-09-M02At3g47520 / malate dehydrogenase (NAD), chloroplast, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL07-14-B18At2g47510 / fumarase -related
     
EC:4.2.1.2
adenylosuccinate lyase
isoleucine degradation I ABCDPP'N
   Cluster:6-1 2313143470.0130386420.0260772842
      RAFL07-15-A09At3g06860 / fatty acid multifunctional protein (AtMFP2)
     
EC:4.2.1.17
enoyl-CoA hydratase
      RAFL11-10-D22At5g43280 / enoyl-CoA hydratase/isomerase family
     
EC:4.2.1.17
enoyl-CoA hydratase
cyanate degradation ABCDPP'N
   Cluster:0-0 234346245.7119486E-40.00228477944
      RAFL06-13-B01At3g01500 / carbonic anhydrase, chloroplast precursor
     
EC:4.2.1.1
carbonate dehydratase
      RAFL06-11-K17At3g01500 / carbonic anhydrase, chloroplast precursor
     
EC:4.2.1.1
carbonate dehydratase
plastoquinone biosynthesis ABCDPP'N
   Cluster:9-1 294445630.0059619560.0238478244
      RAFL11-09-O05At1g06570 / 4-hydroxyphenylpyruvate dioxygenase (HPD)
     
EC:1.13.11.27
4-hydroxyphenylpyruvate dioxygenase
      RAFL11-12-C18At1g06570 / 4-hydroxyphenylpyruvate dioxygenase (HPD)
     
EC:1.13.11.27
4-hydroxyphenylpyruvate dioxygenase
   Cluster:9-0 131546260.040496570.161986284
      RAFL05-14-F20At1g06570 / 4-hydroxyphenylpyruvate dioxygenase (HPD)
     
EC:1.13.11.27
4-hydroxyphenylpyruvate dioxygenase
   Cluster:5-1 2280443770.0464899240.18595974
      RAFL08-16-B22At1g11840 / glyoxalase I, putative (lactoylglutathione lyase)
     
EC:1.13.11.27
4-hydroxyphenylpyruvate dioxygenase
      RAFL09-07-G14At1g67280 / glyoxalase I, putative (lactoylglutathione lyase)
     
EC:1.13.11.27
4-hydroxyphenylpyruvate dioxygenase
pantothenate biosynthesis ABCDPP'N
   Cluster:3-1 1215044470.046322110.046322111
      RAFL07-09-L18At2g40690 / glycerol-3-phosphate dehydrogenase
     
EC:1.1.1.169
2-dehydropantoate 2-reductase
photorespiration ABCDPP'N
   Cluster:1-0 41451744970.00392028360.04312312211
      RAFL09-13-P20At3g14420 / glycolate oxidase -related
     
EC:1.1.3.15
glycolate oxidase
      RAFL06-14-K21At5g36700 / phosphoglycolate phosphatase, putative
     
EC:3.1.3.18
phosphoglycolate phosphatase
      RAFL04-13-N06At1g68010 / glycerate dehydrogenase (NADH-dependent hydroxypyruvate reductase) (HPR)
     
EC:1.1.1.29
phosphoglycerate dehydrogenase
      RAFL08-15-E10At3g14420 / glycolate oxidase -related
     
EC:1.1.3.15
glycolate oxidase
   Cluster:1-2 31711844710.04144380.4558817711
      RAFL05-14-F03At1g23310 / alanine aminotransferase -related
     
EC:2.6.1.4
alanine transaminase
      RAFL09-11-K06At4g13930 / hydroxymethyltransferase
     
EC:2.1.2.1
glycine hydroxymethyltransferase
      RAFL07-12-E03At1g23310 / alanine aminotransferase -related
     
EC:2.6.1.4
alanine transaminase
proline degradation II ABCDPP'N
   Cluster:9-0 428846238.7054286E-77.834886E-69
      RAFL05-21-E06At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
      RAFL04-09-D07At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
      RAFL08-15-L09At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
      RAFL08-09-C23At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.5.1.12
1-pyrroline-5-carboxylate dehydrogenase//aldehyde dehydrogenase
mixed acid fermentation ABCDPP'N
   Cluster:3-0 52281244180.00112575390.01238329211
      RAFL07-17-M04At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL06-07-J21At1g04410 / malate dehydrogenase, cytosolic, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL05-21-P13At2g42600 / phosphoenolpyruvate carboxylase
     
EC:4.1.1.31
phosphoenolpyruvate carboxylase
      RAFL09-09-M02At3g47520 / malate dehydrogenase (NAD), chloroplast, putative
     
EC:1.1.1.37
malate dehydrogenase
      RAFL07-14-B18At2g47510 / fumarase -related
     
EC:4.2.1.2
adenylosuccinate lyase
methionine biosynthesis II ABCDPP'N
   Cluster:1-2 5169544841.4791213E-55.9164853E-54
      RAFL06-12-D05At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
      RAFL11-01-K15At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
      RAFL09-11-C22At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
      RAFL11-06-L17At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
      RAFL09-10-C09At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
   Cluster:0-2 277845760.011678520.046714084
      RAFL08-16-E05At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
      RAFL09-09-A21At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
   Cluster:9-1 294845590.0169511120.067804454
      RAFL05-18-H15At1g64660 / methionine/cystathionine gamma lyase -related
     
EC:4.4.1.8
cystathionine beta-lyase
      RAFL11-02-N11At1g64660 / methionine/cystathionine gamma lyase -related
     
EC:4.4.1.8
cystathionine beta-lyase
fatty acid oxidation pathway III ABCDPP'N
   Cluster:9-0 428246292.7153972E-88.146192E-83
      RAFL05-21-E06At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
      RAFL04-09-D07At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
      RAFL08-15-L09At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
      RAFL08-09-C23At1g54100 / aldehyde dehydrogenase, putative (ALDH)
     
EC:1.2.1.3
unknown
fatty acid oxidation pathway ABCDPP'N
   Cluster:6-1 3312543430.0132484020.079490416
      RAFL07-15-A09At3g06860 / fatty acid multifunctional protein (AtMFP2)
     
EC:4.2.1.17
enoyl-CoA hydratase
      RAFL11-10-D22At5g43280 / enoyl-CoA hydratase/isomerase family
     
EC:4.2.1.17
enoyl-CoA hydratase
      RAFL04-20-G12At3g05970 / AMP-binding protein, putative
     
EC:6.2.1.3
long-chain-fatty-acid-CoA ligase
isoleucine degradation III ABCDPP'N
   Cluster:6-1 2313143470.0130386420.0260772842
      RAFL07-15-A09At3g06860 / fatty acid multifunctional protein (AtMFP2)
     
EC:4.2.1.17
enoyl-CoA hydratase
      RAFL11-10-D22At5g43280 / enoyl-CoA hydratase/isomerase family
     
EC:4.2.1.17
enoyl-CoA hydratase
IAA biosynthesis I ABCDPP'N
   Cluster:8-0 2107345510.0051707660.0206830634
      RAFL08-10-H06At3g44300 / nitrilase 2
     
EC:3.5.5.1
hydrolase, acting on carbon-nitrogen (but not peptide) bonds
      RAFL06-13-E03At3g44300 / nitrilase 2
     
EC:3.5.5.1
hydrolase, acting on carbon-nitrogen (but not peptide) bonds
biotin biosynthesis I ABCDPP'N
   Cluster:7-0 2245244140.0156182020.0468546083
      RAFL05-21-O04At3g08860 / alanine--glyoxylate aminotransferase (beta-alanine-pyruvate aminotransferase/AGT), putative
     
EC:2.6.1.62
4-aminobutyrate transaminase//alanine-glyoxylate transaminase
      RAFL07-12-J17At3g48780 / serine C-palmitoyltransferase, putative
     
EC:2.3.1.47
8-amino-7-oxononanoate synthase
   Cluster:9-0 131346280.0271775180.081532553
      RAFL05-08-B14At2g38400 / alanine--glyoxylate aminotransferase (beta-alanine-pyruvate aminotransferase/AGT), putative
     
EC:2.6.1.62
4-aminobutyrate transaminase//alanine-glyoxylate transaminase
sulfate assimilation III ABCDPP'N
   Cluster:1-2 61681844711.9029251E-40.002093217611
      RAFL06-12-D05At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
      RAFL11-01-K15At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
      RAFL09-11-C22At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
      RAFL11-06-L17At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
      RAFL11-10-I18At1g19920 / sulfate adenylyltransferase
     
EC:2.7.7.4
ATP sulfurylase
      RAFL09-10-C09At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
   Cluster:2-2 3502145890.00237101390.02608115211
      RAFL04-17-H16At3g13110 / serine acetyltransferase (Sat-1)
     
EC:2.3.1.30
serine O-acetyltransferase
      RAFL07-10-P11At3g22890 / ATP sulfurylase -related
     
EC:2.7.7.4
ATP sulfurylase
      RAFL07-12-E10At3g22890 / ATP sulfurylase -related
     
EC:2.7.7.4
ATP sulfurylase
suberin biosynthesis ABCDPP'N
   Cluster:6-2 4172744805.2568526E-40.00315411166
      RAFL09-11-L22At3g53260 / phenylalanine ammonia-lyase (PAL2)
     
EC:4.3.1.5
phenylalanine ammonia-lyase
      RAFL04-13-B02At2g37040 / phenylalanine ammonia lyase (PAL1)
     
EC:4.3.1.5
phenylalanine ammonia-lyase
      RAFL04-16-D08At3g53260 / phenylalanine ammonia-lyase (PAL2)
     
EC:4.3.1.5
phenylalanine ammonia-lyase
      RAFL04-17-C19At4g34050 / caffeoyl-CoA 3-O-methyltransferase
     
EC:2.1.1.104
caffeoyl-CoA O-methyltransferase
   Cluster:7-0 3244844080.0176470060.105882036
      RAFL06-11-J16At2g30490 / cytochrome P450 73 / trans-cinnamate 4-monooxygenase / cinnamate-4-hydroxylase (CYP73) (C4H)
     
EC:1.14.13.11
cinnamate 4-hydroxylase
      RAFL09-15-A15At4g26220 / caffeoyl-CoA 3-O-methyltransferase, putative
     
EC:2.1.1.104
caffeoyl-CoA O-methyltransferase
      RAFL06-07-M15At5g54160 / O-methyltransferase 1
     
EC:2.1.1.68
caffeic acid /5-hydroxyferulic acid o-methyltransferase
cellulose biosynthesis ABCDPP'N
   Cluster:3-1 5211944382.892519E-40.00231401538
      RAFL05-02-P19At5g64740 / cellulose synthase, catalytic subunit, putative
     
EC:2.4.1.12
cellulose synthase (UDP-forming)
      RAFL05-19-M03At5g05170 / cellulose synthase, catalytic subunit (Ath-B)
     
EC:2.4.1.12
cellulose synthase (UDP-forming)
      RAFL09-10-K01At5g22740 / glycosyltransferase family 2
     
EC:2.4.1.12
cellulose synthase (UDP-forming)
      RAFL04-19-E02At4g32410 / cellulose synthase, catalytic subunit, putative
     
EC:2.4.1.12
cellulose synthase (UDP-forming)
      RAFL05-02-G06At5g49720 / glycosyl hydrolase family 9 (endo-1,4-beta-glucanase)
     
EC:3.2.1.4
1,4-b-D-glucan 4-glucanohydrolase
   Cluster:7-2 2621245870.0151757720.1214061758
      RAFL05-09-M07At5g64740 / cellulose synthase, catalytic subunit, putative
     
EC:2.4.1.12
cellulose synthase (UDP-forming)
      RAFL09-16-P14At3g03050 / cellulose synthase family
     
EC:2.4.1.12
cellulose synthase (UDP-forming)
xylose degradation ABCDPP'N
   Cluster:8-0 1108145530.04620950.0924192
      RAFL05-15-K08At5g57655 / expressed protein
     
EC:5.3.1.5
xylose isomerase
glutamine degradation III ABCDPP'N
   Cluster:3-0 2231444260.0326361770.13054474
      RAFL07-14-B18At2g47510 / fumarase -related
     
EC:4.3.1.1
fumarate hydratase
      RAFL09-07-B08At2g30970 / aspartate aminotransferase, mitochondrial (transaminase A/Asp1)
     
EC:2.6.1.1
1-aminocyclopropane-1-carboxylate synthase
cysteine biosynthesis I ABCDPP'N
   Cluster:2-0 2148445090.0141614140.070807075
      RAFL05-10-D20At3g59760 / cysteine synthase, mitochondrial (O-acetylserine (thiol)-lyase/O-acetylserine sulfhydrylase), putative
     
EC:4.2.99.8
cystathionine beta-synthase//lyase
      RAFL07-18-N19At3g61440 / cysteine synthase (O-acetylserine (thiol)-lyase/O-acetylserine sulfhydrylase/AtcysC1)
     
EC:4.2.99.8
cystathionine beta-synthase//lyase
methionine degradation I ABCDPP'N
   Cluster:3-2 433646206.813379E-73.4066893E-65
      RAFL09-06-N12At3g23810 / S-adenosyl-L-homocysteinas -related
     
EC:3.3.1.1
adenosylhomocysteinase
      RAFL07-09-L01At3g23810 / S-adenosyl-L-homocysteinas -related
     
EC:3.3.1.1
adenosylhomocysteinase
      RAFL09-13-P13At3g23810 / S-adenosyl-L-homocysteinas -related
     
EC:3.3.1.1
adenosylhomocysteinase
      RAFL09-10-M18At3g23810 / S-adenosyl-L-homocysteinas -related
     
EC:3.3.1.1
adenosylhomocysteinase
   Cluster:1-0 2147845060.0385709260.192854635
      RAFL02-08-J05At3g17390 / s-adenosylmethionine synthetase -related
     
EC:2.5.1.6
methionine adenosyltransferase
      RAFL05-12-C12At3g17390 / s-adenosylmethionine synthetase -related
     
EC:2.5.1.6
methionine adenosyltransferase
citrulline degradation ABCDPP'N
   Cluster:3-1 1215044470.046322110.046322111
      RAFL07-16-F16At3g20330 / aspartate carbamoyltransferase precursor (aspartate transcarbamylase)
     
EC:2.1.3.3
ornithine carbamoyltransferase
valine biosynthesis ABCDPP'N
   Cluster:4-0 2238544180.0466700570.233350295
      RAFL06-16-L13At5g54960 / pyruvate decarboxylase (gb|AAB16855.1)
     
EC:4.1.3.18
acetolactate synthase
      RAFL09-18-P18At3g48560 / acetolactate synthase
     
EC:4.1.3.18
acetolactate synthase
   Cluster:2-1 2242544140.048101910.240509545
      RAFL02-01-G08At3g58610 / ketol-acid reductoisomerase
     
EC:1.1.1.86
ketol-acid reductoisomerase
      RAFL04-13-D06At3g23940 / dihydroxyacid dehydratase -related
     
EC:4.2.1.9
unknown
Calvin cycle ABCDPP'N
   Cluster:0-1 21853145264.2892147E-224.7181364E-2111
      RAFL07-18-C20At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-15-L04At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL07-14-L16At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL08-18-C10At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-12-E12At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-07-I23At1g56190 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL04-13-J02At3g54050 / fructose-bisphosphatase precursor
     
EC:3.1.3.11
fructose-bisphosphatase//phosphoric ester hydrolase
      RAFL07-12-M09At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL07-16-P05At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL09-06-P15At1g67090 / ribulose-bisphosphate carboxylase small unit -related
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL09-18-L22At3g12780 / phosphoglycerate kinase -related
     
EC:2.7.2.3
phosphoglycerate kinase
      RAFL04-19-O21At4g38970 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-17-N23At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL05-12-O19At3g55800 / sedoheptulose-bisphosphatase precursor
     
EC:3.1.3.37
unknown
      RAFL04-19-M17At1g32060 / phosphoribulokinase precursor
     
EC:2.7.1.19
phosphoribulokinase
      RAFL04-10-J07At3g04790 / ribose 5-phosphate isomerase -related
     
EC:5.3.1.6
ribose-5-phosphate isomerase
      RAFL07-18-J01At2g21330 / fructose-bisphosphate aldolase, putative
     
EC:4.1.2.13
fructose-bisphosphate aldolase
      RAFL09-06-K21At1g67090 / ribulose-bisphosphate carboxylase small unit -related
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL03-06-F08At1g67090 / ribulose-bisphosphate carboxylase small unit -related
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL11-07-D01At5g38410 / ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (sp|P10798)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL11-02-L02At1g67090 / ribulose-bisphosphate carboxylase small unit -related
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
   Cluster:0-0 15213745902.6605689E-212.9266258E-2011
      RAFL06-14-C19At5g38410 / ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (sp|P10798)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL06-10-O15At5g38420 / ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (sp|P10797)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL06-13-H11At5g38430 / ribulose bisphosphate carboxylase small chain 1b precursor (RuBisCO small subunit 1b) (sp|P10796)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL09-09-L07At1g67090 / ribulose-bisphosphate carboxylase small unit -related
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL06-14-L16At5g38430 / ribulose bisphosphate carboxylase small chain 1b precursor (RuBisCO small subunit 1b) (sp|P10796)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL04-15-J15At5g38410 / ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (sp|P10798)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL06-08-L09At5g38420 / ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (sp|P10797)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL07-14-L17At5g38420 / ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (sp|P10797)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL06-14-C14At1g67090 / ribulose-bisphosphate carboxylase small unit -related
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL08-17-J10At5g38420 / ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (sp|P10797)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL06-07-I02At1g67090 / ribulose-bisphosphate carboxylase small unit -related
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL11-03-H09At1g67090 / ribulose-bisphosphate carboxylase small unit -related
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL09-16-C21At5g38410 / ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (sp|P10798)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL09-09-K05At5g38410 / ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (sp|P10798)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL07-11-L12At5g38420 / ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (sp|P10797)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
methionine and <I>S</I>-adenosylmethionine synthesis ABCDPP'N
   Cluster:1-2 5169844816.892205E-54.135323E-46
      RAFL06-12-D05At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
      RAFL11-01-K15At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
      RAFL09-11-C22At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
      RAFL11-06-L17At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
      RAFL09-10-C09At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
   Cluster:0-2 2771145730.0195886340.11753186
      RAFL08-16-E05At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
      RAFL09-09-A21At5g17920 / 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
     
EC:2.1.1.14
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
starch degradation ABCDPP'N
   Cluster:5-2 2124545320.0139177470.0695887365
      RAFL05-03-E09At5g64860 / glycosyl hydrolase family 77 (4-alpha-glucanotransferase)
     
EC:2.4.1.25
disproportionating enzyme
      RAFL09-14-L23At5g11720 / glycosyl hydrolase family 31
     
EC:3.2.1.20
unknown
   Cluster:3-0 2231544250.0442061420.22103075
      RAFL08-08-F08At1g69830 / alpha-amylase (1,4-alpha-D-glucan glucanohydrolase), putative
     
EC:3.2.1.1
alpha-amylase
      RAFL08-09-A13At3g29320 / glucan phosphorylase, putative
     
EC:2.4.1.1
starch phosphorylase
sterol biosynthesis ABCDPP'N
   Cluster:3-1 2214544420.038449680.19224845
      RAFL11-10-O06At1g50430 / sterol delta-7 reductase (7-dehydrocholesterol reductase) (dwarf5) (DWF5)
     
EC:1.3.1.21
sterol Δ<sup>7</sup> reductase
      RAFL02-01-C03At1g76090 / S-adenosyl-methionine-sterol-C-methyltransferase -related
     
EC:2.1.1.143
24-methylenelophenol-C24-methyltransferase
   Cluster:2-1 2242544140.048101910.240509545
      RAFL07-16-C24At1g20330 / sterol-C-methyltransferase
     
EC:2.1.1.143
24-methylenelophenol-C24-methyltransferase
      RAFL07-09-C04At1g11680 / obtusifoliol 14-demethylase (CYP51)
     
EC:1.14.13.70
obtusifoliol 14α-demethylase
methionine degradation II ABCDPP'N
   Cluster:9-1 294045674.1952432E-44.1952432E-41
      RAFL05-18-H15At1g64660 / methionine/cystathionine gamma lyase -related
     
EC:4.4.1.11
1-aminocyclopropane-1-carboxylate synthase
      RAFL11-02-N11At1g64660 / methionine/cystathionine gamma lyase -related
     
EC:4.4.1.11
1-aminocyclopropane-1-carboxylate synthase
NAD phosphorylation and dephosphorylation ABCDPP'N
   Cluster:3-0 1232044300.0499678330.0499678331
      RAFL05-10-H23At1g21640 / expressed protein
     
EC:2.7.1.23
NAD+ kinase
aerobic respiration -- electron donors reaction list ABCDPP'N
   Cluster:4-1 53051143420.00298311960.0208818357
      RAFL05-04-N24At3g18410 / expressed protein
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL11-02-J20At3g12260 / expressed protein
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL09-10-O11At3g12260 / expressed protein
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL09-18-I01At5g08530 / NADH-ubiquinone oxidoreductase (mitochondrial), putative
     
EC:1.6.5.3 ,EC:1.18.99.1
NADH dehydrogenase (ubiquinone)
      RAFL06-08-D19At5g37510 / NADH dehydrogenase (ubiquinone), mitochondrial, putative
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
   Cluster:6-0 31371345100.0111341080.077938767
      RAFL06-16-I03At5g09600 / expressed protein
     
EC:1.3.5.1
succinate dehydrogenase (ubiquinone)
      RAFL08-12-A05At5g11770 / NADH dehydrogenase (ubiquinone)
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL05-17-L16At1g79010 / NADH dehydrogenase -related
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
   Cluster:6-1 43111243360.0194344730.136041317
      RAFL06-10-E05At1g16700 / NADH:ubiquinone oxidoreductase -related
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL05-08-F21At3g03100 / expressed protein
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL05-17-A04At5g09600 / expressed protein
     
EC:1.3.5.1
succinate dehydrogenase (ubiquinone)
      RAFL07-07-N09At5g37510 / NADH dehydrogenase (ubiquinone), mitochondrial, putative
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
GDP-D-rhamnose biosynthesis ABCDPP'N
   Cluster:3-2 235746190.00212977430.0106488725
      RAFL09-16-F08At3g23820 / NAD-dependent epimerase/dehydratase family
     
EC:4.2.1.47
3-beta-hydroxy-delta5-steroid dehydrogenase
      RAFL09-07-D12At3g23820 / NAD-dependent epimerase/dehydratase family
     
EC:4.2.1.47
3-beta-hydroxy-delta5-steroid dehydrogenase
   Cluster:3-1 3213644410.00669093850.033454695
      RAFL05-07-A06At4g33360 / terpene cyclase/mutase-related
     
EC:4.2.1.47
3-beta-hydroxy-delta5-steroid dehydrogenase
      RAFL08-14-D02At2g39770 / GDP-mannose pyrophosphorylase
     
EC:2.7.7.22
unknown
      RAFL08-13-A07At2g45790 / phosphomannomutase -related
     
EC:5.4.2.8
phosphomannomutase
degradation of short-chain fatty acids ABCDPP'N
   Cluster:3-1 1215044470.046322110.046322111
      RAFL08-11-A03At5g48230 / acetyl-CoA C-acetyltransferase (acetoacetyl-coenzyme A thiolase), putative
     
EC:2.3.1.9
acetyl-CoA C-acetyltransferase
non-oxidative branch of the pentose phosphate pathway ABCDPP'N
   Cluster:3-0 2231544250.0442061420.265236856
      RAFL05-21-O08At5g61410 / ribulose-5-phosphate-3-epimerase
     
EC:5.1.3.1
ribulose-phosphate 3-epimerase
      RAFL11-02-F16At3g01850 / D-ribulose-5-phosphate 3-epimerase -related
     
EC:5.1.3.1
ribulose-phosphate 3-epimerase
de novo biosynthesis of purine nucleotides I ABCDPP'N
   Cluster:2-1 42401044090.00482823140.0434540859
      RAFL04-17-H07At3g57610 / adenylosuccinate synthetase
     
EC:6.3.4.4
adenylosuccinate synthase
      RAFL04-13-M20At4g11010 / nucleoside diphosphate kinase 3 (ndpk3)
     
EC:2.7.4.6
nucleoside-diphosphate kinase
      RAFL04-18-P17At5g35170 / adenylate kinase -related protein
     
EC:2.7.4.3
adenylate kinase
      RAFL04-12-O11At3g27740 / carbamoyl-phosphate synthase (glutamine-hydrolyzing) (glutamine-dependent carbamoyl-phosphate synthase) small subunit
     
EC:6.3.5.2
GMP synthase (glutamine-hydrolyzing)
chlorophyll biosynthesis ABCDPP'N
   Cluster:3-2 4331146154.3046944E-63.4437555E-58
      RAFL09-06-N12At3g23810 / S-adenosyl-L-homocysteinas -related
     
EC:4.3.1.8
adenosylhomocysteinase
      RAFL07-09-L01At3g23810 / S-adenosyl-L-homocysteinas -related
     
EC:4.3.1.8
adenosylhomocysteinase
      RAFL09-13-P13At3g23810 / S-adenosyl-L-homocysteinas -related
     
EC:4.3.1.8
adenosylhomocysteinase
      RAFL09-10-M18At3g23810 / S-adenosyl-L-homocysteinas -related
     
EC:4.3.1.8
adenosylhomocysteinase
   Cluster:2-1 32411244070.0403601640.32288138
      RAFL04-17-P12At4g13940 / adenosylhomocysteinase
     
EC:4.3.1.8
adenosylhomocysteinase
      RAFL05-10-J03At1g69740 / porphobilinogen synthase (delta-aminolevulinic acid dehydratase), putative
     
EC:4.2.1.24
porphobilinogen synthase
      RAFL04-15-N01At1g69740 / porphobilinogen synthase (delta-aminolevulinic acid dehydratase), putative
     
EC:4.2.1.24
porphobilinogen synthase
tRNA charging pathway ABCDPP'N
   Cluster:4-2 41311345150.00119265560.0107339019
      RAFL04-15-H14At4g26870 / aspartate-tRNA ligase (aspartyl-tRNA synthetase), putative
     
EC:6.1.1.12 ,EC:6.1.1.22 ,EC:6.1.1.20 ,EC:6.1.1.6
asparagine-tRNA ligase
lysine-tRNA ligase
phenylalanine-tRNA ligase
      RAFL04-19-C07At3g62120 / multifunctional aminoacyl-tRNA ligase-related protein
     
EC:6.1.1.3 ,EC:6.1.1.15
threonine-tRNA ligase
glycine-tRNA ligase
      RAFL05-08-P23At3g59980 / expressed protein
     
EC:6.1.1.10 ,EC:6.1.1.20
isoleucine-tRNA ligase//leucine-tRNA ligase
phenylalanine-tRNA ligase
      RAFL02-09-F04At5g26830 / threonyl-tRNA synthetase
     
EC:6.1.1.3 ,EC:6.1.1.15 ,EC:6.1.1.14
threonine-tRNA ligase
glycine-tRNA ligase
   Cluster:3-1 32131444330.0412290320.37106139
      RAFL07-14-N04At2g25840 / trytophanyl-tRNA synthetase -related
     
EC:6.1.1.2
tryptophan-tRNA ligase
      RAFL09-09-E22At4g39280 / phenylalanyl-trna synthetase - like protein
     
EC:6.1.1.20
phenylalanine-tRNA ligase
      RAFL04-16-L11At1g29880 / glycyl tRNA synthetase -related
     
EC:6.1.1.14
glycine-tRNA ligase
thiamine biosynthesis ABCDPP'N
   Cluster:0-2 178245820.0499799660.14993993
      RAFL04-15-A04At4g15560 / DEF (CLA1) protein
     
EC:4.1.3.37
1-deoxy-D-xylulose-5-phosphate synthase
aldoxime degradation ABCDPP'N
   Cluster:8-2 161245990.03936880.11810643
      RAFL02-08-C20At4g08790 / nitrilase 1 like protein
     
EC:4.2.1.84
hydrolase, acting on carbon-nitrogen (but not peptide) bonds
D-arabinose degradation II ABCDPP'N
   Cluster:3-0 2231144290.0072133320.0144266642
      RAFL05-21-O08At5g61410 / ribulose-5-phosphate-3-epimerase
     
EC:5.1.3.1
ribulose-phosphate 3-epimerase
      RAFL11-02-F16At3g01850 / D-ribulose-5-phosphate 3-epimerase -related
     
EC:5.1.3.1
ribulose-phosphate 3-epimerase
 
Cluster:6-0 ABCDPP'N
   aerobic respiration -- electron donors reaction list 31371345100.0111341080.077938767
      RAFL06-16-I03At5g09600 / expressed protein
     
EC:1.3.5.1
succinate dehydrogenase (ubiquinone)
      RAFL08-12-A05At5g11770 / NADH dehydrogenase (ubiquinone)
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL05-17-L16At1g79010 / NADH dehydrogenase -related
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
   respiration (anaerobic)-- electron donors reaction list 21381045130.0485075670.242537845
      RAFL08-12-A05At5g11770 / NADH dehydrogenase (ubiquinone)
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL05-17-L16At1g79010 / NADH dehydrogenase -related
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
Cluster:3-1 ABCDPP'N
   arginine biosynthesis I 4212244456.244364E-51.8733094E-43
      RAFL07-16-F16At3g20330 / aspartate carbamoyltransferase precursor (aspartate transcarbamylase)
     
EC:2.1.3.3
ornithine carbamoyltransferase
      RAFL07-18-A10At2g37500 / glutamate/ornithine acetyltransferase -related
     
EC:2.3.1.35 ,EC:2.3.1.1
glutamate N-acetyltransferase
acetylglutamate kinase
      RAFL07-08-L02At5g10920 / argininosuccinate lyase (AtArgH)
     
EC:4.3.2.1
adenylosuccinate lyase
      RAFL04-16-G24At1g80600 / acetylornithine aminotransferase, mitochondrial (acetylornithine transaminase/AOTA/ACOAT), putative
     
EC:2.6.1.11
acetylornithine transaminase
   cellulose biosynthesis 5211944382.892519E-40.00231401538
      RAFL05-02-P19At5g64740 / cellulose synthase, catalytic subunit, putative
     
EC:2.4.1.12
cellulose synthase (UDP-forming)
      RAFL05-19-M03At5g05170 / cellulose synthase, catalytic subunit (Ath-B)
     
EC:2.4.1.12
cellulose synthase (UDP-forming)
      RAFL09-10-K01At5g22740 / glycosyltransferase family 2
     
EC:2.4.1.12
cellulose synthase (UDP-forming)
      RAFL04-19-E02At4g32410 / cellulose synthase, catalytic subunit, putative
     
EC:2.4.1.12
cellulose synthase (UDP-forming)
      RAFL05-02-G06At5g49720 / glycosyl hydrolase family 9 (endo-1,4-beta-glucanase)
     
EC:3.2.1.4
1,4-b-D-glucan 4-glucanohydrolase
   ascorbate biosynthesis 3213144463.7887847E-47.5775693E-42
      RAFL08-14-D02At2g39770 / GDP-mannose pyrophosphorylase
     
EC:2.7.7.13
GDP-D-mannose pyrophosphorylase
      RAFL08-13-A07At2g45790 / phosphomannomutase -related
     
EC:5.4.2.8
phosphomannomutase
      RAFL04-15-P16At5g28840 / NAD-dependent epimerase/dehydratase family
     
EC:5.1.3.18
GDP-D-mannose-3,5-epimerase
   serine biosynthesis 2214044470.00213626210.00213626211
      RAFL04-10-L08At4g34200 / D-3-phosphoglycerate dehydrogenase (3-PGDH), putative
     
EC:1.1.1.95
phosphoglycerate dehydrogenase
      RAFL04-18-D17At4g35630 / phosphoserine aminotransferase
     
EC:2.6.1.52
triacylglycerol lipase
   cysteine biosynthesis II 2214044470.00213626210.00213626211
      RAFL04-10-L08At4g34200 / D-3-phosphoglycerate dehydrogenase (3-PGDH), putative
     
EC:1.1.1.95
phosphoglycerate dehydrogenase
      RAFL04-18-D17At4g35630 / phosphoserine aminotransferase
     
EC:2.6.1.52
triacylglycerol lipase
   glycerol degradation II 62102644210.00303288250.04549323815
      RAFL07-10-P13At1g09780 / 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -related
     
EC:5.4.2.1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
      RAFL05-01-I24At3g55440 / triosephosphate isomerase, cytosolic, putative
     
EC:5.3.1.1
triose-phosphate isomerase
      RAFL05-21-G03At3g22960 / pyruvate kinase, putative
     
EC:2.7.1.40
pyruvate kinase
      RAFL04-13-O10At2g29560 / enolase (2-phospho-D-glycerate hydroylase) -related
     
EC:4.2.1.11
phosphopyruvate hydratase
      RAFL09-12-D13At5g52920 / pyruvate kinase, putative
     
EC:2.7.1.40
pyruvate kinase
      RAFL07-09-L18At2g40690 / glycerol-3-phosphate dehydrogenase
     
EC:1.1.1.8
glycerol-3-phosphate dehydrogenase (NAD+)
   GDP-mannose metabolism 2214144460.00621262240.0124252452
      RAFL08-14-D02At2g39770 / GDP-mannose pyrophosphorylase
     
EC:2.7.7.22
unknown
      RAFL08-13-A07At2g45790 / phosphomannomutase -related
     
EC:5.4.2.8
phosphomannomutase
   non-phosphorylated glucose degradation 42121344340.0066169240.0661692410
      RAFL05-11-L02At4g25900 / aldose 1-epimerase family
     
EC:5.1.3.3
aldose 1-epimerase
      RAFL05-21-G03At3g22960 / pyruvate kinase, putative
     
EC:2.7.1.40
pyruvate kinase
      RAFL04-13-O10At2g29560 / enolase (2-phospho-D-glycerate hydroylase) -related
     
EC:4.2.1.11
phosphopyruvate hydratase
      RAFL09-12-D13At5g52920 / pyruvate kinase, putative
     
EC:2.7.1.40
pyruvate kinase
   GDP-D-rhamnose biosynthesis 3213644410.00669093850.033454695
      RAFL05-07-A06At4g33360 / terpene cyclase/mutase-related
     
EC:4.2.1.47
3-beta-hydroxy-delta5-steroid dehydrogenase
      RAFL08-14-D02At2g39770 / GDP-mannose pyrophosphorylase
     
EC:2.7.7.22
unknown
      RAFL08-13-A07At2g45790 / phosphomannomutase -related
     
EC:5.4.2.8
phosphomannomutase
   tryptophan biosynthesis 2214544420.038449680.19224845
      RAFL05-16-L22At5g48220 / indole-3-glycerol phosphate synthase (IGPS), putative
     
EC:4.1.1.48
indole-3-glycerol-phosphate synthase
      RAFL05-13-G12At1g07780 / phosphoribosylanthranilate isomerase (PAI1)
     
EC:5.3.1.24
phosphoribosylanthranilate isomerase
   sterol biosynthesis 2214544420.038449680.19224845
      RAFL11-10-O06At1g50430 / sterol delta-7 reductase (7-dehydrocholesterol reductase) (dwarf5) (DWF5)
     
EC:1.3.1.21
sterol Δ<sup>7</sup> reductase
      RAFL02-01-C03At1g76090 / S-adenosyl-methionine-sterol-C-methyltransferase -related
     
EC:2.1.1.143
24-methylenelophenol-C24-methyltransferase
   tRNA charging pathway 32131444330.0412290320.37106139
      RAFL07-14-N04At2g25840 / trytophanyl-tRNA synthetase -related
     
EC:6.1.1.2
tryptophan-tRNA ligase
      RAFL09-09-E22At4g39280 / phenylalanyl-trna synthetase - like protein
     
EC:6.1.1.20
phenylalanine-tRNA ligase
      RAFL04-16-L11At1g29880 / glycyl tRNA synthetase -related
     
EC:6.1.1.14
glycine-tRNA ligase
   citrulline degradation 1215044470.046322110.046322111
      RAFL07-16-F16At3g20330 / aspartate carbamoyltransferase precursor (aspartate transcarbamylase)
     
EC:2.1.3.3
ornithine carbamoyltransferase
   tryptophan degradation III 1215044470.046322110.046322111
      RAFL08-11-A03At5g48230 / acetyl-CoA C-acetyltransferase (acetoacetyl-coenzyme A thiolase), putative
     
EC:2.3.1.9
acetyl-CoA C-acetyltransferase
   degradation of short-chain fatty acids 1215044470.046322110.046322111
      RAFL08-11-A03At5g48230 / acetyl-CoA C-acetyltransferase (acetoacetyl-coenzyme A thiolase), putative
     
EC:2.3.1.9
acetyl-CoA C-acetyltransferase
   pantothenate biosynthesis 1215044470.046322110.046322111
      RAFL07-09-L18At2g40690 / glycerol-3-phosphate dehydrogenase
     
EC:1.1.1.169
2-dehydropantoate 2-reductase
   glycolysis I 52113844090.046854520.702817815
      RAFL07-10-P13At1g09780 / 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -related
     
EC:5.4.2.1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
      RAFL05-01-I24At3g55440 / triosephosphate isomerase, cytosolic, putative
     
EC:5.3.1.1
triose-phosphate isomerase
      RAFL05-21-G03At3g22960 / pyruvate kinase, putative
     
EC:2.7.1.40
pyruvate kinase
      RAFL04-13-O10At2g29560 / enolase (2-phospho-D-glycerate hydroylase) -related
     
EC:4.2.1.11
phosphopyruvate hydratase
      RAFL09-12-D13At5g52920 / pyruvate kinase, putative
     
EC:2.7.1.40
pyruvate kinase
   de novo biosynthesis of pyrimidine ribonucleotides 2214644410.0497271940.248635985
      RAFL07-16-F16At3g20330 / aspartate carbamoyltransferase precursor (aspartate transcarbamylase)
     
EC:2.1.3.2
unknown
      RAFL05-01-N17At5g67220 / nitrogen regulation protein family (NIFR3)
     
EC:1.3.3.1
dihydroorotate dehydrogenase
Cluster:8-1 ABCDPP'N
   flavonoid biosynthesis 2160145000.00351698230.00703396462
      RAFL04-16-O21At5g24530 / oxidoreductase, 2OG-Fe(II) oxygenase family
     
EC:1.14.11.9
flavanone 3-hydroxylase||isopenicillin-N synthase
      RAFL05-17-O13At3g21230 / 4-coumarate:CoA ligase (4-coumaroyl-CoA synthase) (4CL), putative
     
EC:6.2.1.12
4-coumarate-CoA ligase
   polyamine biosynthesis II 2160844930.0449447040.314612937
      RAFL04-17-I02At2g16500 / arginine decarboxylase
     
EC:4.1.1.19
arginine decarboxylase
      RAFL05-09-J16At5g53120 / spermidine synthase
     
EC:2.5.1.16
spermidine synthase
   polyamine biosynthesis III 2160844930.0449447040.314612937
      RAFL04-17-I02At2g16500 / arginine decarboxylase
     
EC:4.1.1.19
arginine decarboxylase
      RAFL05-09-J16At5g53120 / spermidine synthase
     
EC:2.5.1.16
spermidine synthase
Cluster:1-1 ABCDPP'N
   peptidoglycan biosynthesis 2103145570.00148477450.0029695492
      RAFL09-13-M20At1g31070 / UDP-N-acetylglucosamine pyrophosphorylase-related protein
     
EC:2.7.7.23
UDP-N-acetylglucosamine diphosphorylase
      RAFL09-18-H10At5g19220 / glucose-1-phosphate adenylyltransferase, large subunit 1, chloroplast (ADP-glucose pyrophosphorylase) (ADG2) (APL1)
     
EC:2.7.7.23
UDP-N-acetylglucosamine diphosphorylase
   UDP-N-acetylglucosamine biosynthesis 2103245560.00292587580.0087776283
      RAFL09-13-M20At1g31070 / UDP-N-acetylglucosamine pyrophosphorylase-related protein
     
EC:2.7.7.23
UDP-N-acetylglucosamine diphosphorylase
      RAFL09-18-H10At5g19220 / glucose-1-phosphate adenylyltransferase, large subunit 1, chloroplast (ADP-glucose pyrophosphorylase) (ADG2) (APL1)
     
EC:2.7.7.23
UDP-N-acetylglucosamine diphosphorylase
   riboflavin and FMN and FAD biosynthesis 1104145570.044533060.089066122
      RAFL08-12-F18At2g44050 / 6,7-dimethyl-8-ribityllumazine synthase precursor
     
EC:2.5.1.9
riboflavin synthase
Cluster:5-2 ABCDPP'N
   nitrate assimilation pathway 3123845290.00271202020.0216961618
      RAFL09-13-L09At1g37130 / nitrate reductase 2 (NR2)
     
EC:1.7.1.1
nitrate reductase
      RAFL09-11-J22At1g37130 / nitrate reductase 2 (NR2)
     
EC:1.7.1.1
nitrate reductase
      RAFL11-09-K10At1g37130 / nitrate reductase 2 (NR2)
     
EC:1.7.1.1
nitrate reductase
   starch degradation 2124545320.0139177470.0695887365
      RAFL05-03-E09At5g64860 / glycosyl hydrolase family 77 (4-alpha-glucanotransferase)
     
EC:2.4.1.25
disproportionating enzyme
      RAFL09-14-L23At5g11720 / glycosyl hydrolase family 31
     
EC:3.2.1.20
unknown
   dTDP-rhamnose biosynthesis 2124745300.0230298730.138179246
      RAFL04-09-G05At1g50450 / expressed protein
     
EC:4.2.1.46
dTDP-glucose 4,6-dehydratase
      RAFL07-11-C21At4g30440 / nucleotide sugar epimerase family
     
EC:4.2.1.46
dTDP-glucose 4,6-dehydratase
Cluster:2-0 ABCDPP'N
   cysteine biosynthesis I 2148445090.0141614140.070807075
      RAFL05-10-D20At3g59760 / cysteine synthase, mitochondrial (O-acetylserine (thiol)-lyase/O-acetylserine sulfhydrylase), putative
     
EC:4.2.99.8
cystathionine beta-synthase//lyase
      RAFL07-18-N19At3g61440 / cysteine synthase (O-acetylserine (thiol)-lyase/O-acetylserine sulfhydrylase/AtcysC1)
     
EC:4.2.99.8
cystathionine beta-synthase//lyase
   de novo biosynthesis of pyrimidine ribonucleotides 2148645070.0253399780.126699885
      RAFL04-20-D06At4g09320 / nucleoside-diphosphate kinase
     
EC:2.7.4.6
nucleoside-diphosphate kinase
      RAFL09-12-G17At1g29900 / carbamoylphosphate synthetase -related
     
EC:6.3.5.5
carbamoyl-phosphate synthase
   TCA cycle variation IV 31472144920.0402716470.604074715
      RAFL09-06-L20At1g65930 / isocitrate dehydrogenase (NADP+), putative
     
EC:1.1.1.42
3-isopropylmalate dehydrogenase
      RAFL09-07-F20At1g65930 / isocitrate dehydrogenase (NADP+), putative
     
EC:1.1.1.42
3-isopropylmalate dehydrogenase
      RAFL09-11-A18At1g65930 / isocitrate dehydrogenase (NADP+), putative
     
EC:1.1.1.42
3-isopropylmalate dehydrogenase
Cluster:6-1 ABCDPP'N
   isoleucine degradation III 2313143470.0130386420.0260772842
      RAFL07-15-A09At3g06860 / fatty acid multifunctional protein (AtMFP2)
     
EC:4.2.1.17
enoyl-CoA hydratase
      RAFL11-10-D22At5g43280 / enoyl-CoA hydratase/isomerase family
     
EC:4.2.1.17
enoyl-CoA hydratase
   isoleucine degradation I 2313143470.0130386420.0260772842
      RAFL07-15-A09At3g06860 / fatty acid multifunctional protein (AtMFP2)
     
EC:4.2.1.17
enoyl-CoA hydratase
      RAFL11-10-D22At5g43280 / enoyl-CoA hydratase/isomerase family
     
EC:4.2.1.17
enoyl-CoA hydratase
   fatty acid oxidation pathway 3312543430.0132484020.079490416
      RAFL07-15-A09At3g06860 / fatty acid multifunctional protein (AtMFP2)
     
EC:4.2.1.17
enoyl-CoA hydratase
      RAFL11-10-D22At5g43280 / enoyl-CoA hydratase/isomerase family
     
EC:4.2.1.17
enoyl-CoA hydratase
      RAFL04-20-G12At3g05970 / AMP-binding protein, putative
     
EC:6.2.1.3
long-chain-fatty-acid-CoA ligase
   aerobic respiration -- electron donors reaction list 43111243360.0194344730.136041317
      RAFL06-10-E05At1g16700 / NADH:ubiquinone oxidoreductase -related
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL05-08-F21At3g03100 / expressed protein
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL05-17-A04At5g09600 / expressed protein
     
EC:1.3.5.1
succinate dehydrogenase (ubiquinone)
      RAFL07-07-N09At5g37510 / NADH dehydrogenase (ubiquinone), mitochondrial, putative
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
   aspartate biosynthesis and degradation 2313243460.0249164940.0747494853
      RAFL04-17-L05At5g19550 / aspartate aminotransferase, cytoplasmic isozyme 1 (transaminase A/Asp2)
     
EC:2.6.1.1
1-aminocyclopropane-1-carboxylate synthase
      RAFL11-09-A12At5g19550 / aspartate aminotransferase, cytoplasmic isozyme 1 (transaminase A/Asp2)
     
EC:2.6.1.1
1-aminocyclopropane-1-carboxylate synthase
   aspartate degradation I 2313343450.0396896640.119068993
      RAFL04-17-L05At5g19550 / aspartate aminotransferase, cytoplasmic isozyme 1 (transaminase A/Asp2)
     
EC:2.6.1.1
aspartate transaminase
      RAFL11-09-A12At5g19550 / aspartate aminotransferase, cytoplasmic isozyme 1 (transaminase A/Asp2)
     
EC:2.6.1.1
aspartate transaminase
   asparagine biosynthesis I 2313343450.0396896640.158758664
      RAFL04-17-L05At5g19550 / aspartate aminotransferase, cytoplasmic isozyme 1 (transaminase A/Asp2)
     
EC:2.6.1.1
aspartate transaminase
      RAFL11-09-A12At5g19550 / aspartate aminotransferase, cytoplasmic isozyme 1 (transaminase A/Asp2)
     
EC:2.6.1.1
aspartate transaminase
   respiration (anaerobic)-- electron donors reaction list 3312943390.0425574520.212787275
      RAFL06-10-E05At1g16700 / NADH:ubiquinone oxidoreductase -related
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL05-08-F21At3g03100 / expressed protein
     
EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
      RAFL07-07-N09At5g37510 / NADH dehydrogenase (ubiquinone), mitochondrial, putative
     
EC:1.2.1.2 ,EC:1.6.5.3
NADH dehydrogenase (ubiquinone)
formate dehydrogenase
Cluster:0-0 ABCDPP'N
   Calvin cycle 15213745902.6605689E-212.9266258E-2011
      RAFL06-14-C19At5g38410 / ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (sp|P10798)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL06-10-O15At5g38420 / ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (sp|P10797)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL06-13-H11At5g38430 / ribulose bisphosphate carboxylase small chain 1b precursor (RuBisCO small subunit 1b) (sp|P10796)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL09-09-L07At1g67090 / ribulose-bisphosphate carboxylase small unit -related
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL06-14-L16At5g38430 / ribulose bisphosphate carboxylase small chain 1b precursor (RuBisCO small subunit 1b) (sp|P10796)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL04-15-J15At5g38410 / ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (sp|P10798)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL06-08-L09At5g38420 / ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (sp|P10797)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL07-14-L17At5g38420 / ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (sp|P10797)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL06-14-C14At1g67090 / ribulose-bisphosphate carboxylase small unit -related
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL08-17-J10At5g38420 / ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (sp|P10797)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL06-07-I02At1g67090 / ribulose-bisphosphate carboxylase small unit -related
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL11-03-H09At1g67090 / ribulose-bisphosphate carboxylase small unit -related
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL09-16-C21At5g38410 / ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (sp|P10798)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL09-09-K05At5g38410 / ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (sp|P10798)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
      RAFL07-11-L12At5g38420 / ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (sp|P10797)
     
EC:4.1.1.39
ribulose-bisphosphate carboxylase
   cyanate degradation 234346245.7119486E-40.00228477944
      RAFL06-13-B01At3g01500 / carbonic anhydrase, chloroplast precursor
     
EC:4.2.1.1
carbonate dehydratase
      RAFL06-11-K17At3g01500 / carbonic anhydrase, chloroplast precursor
     
EC:4.2.1.1
carbonate dehydratase
Cluster:4-0 ABCDPP'N
   threonine degradation 3237744160.0123404630.074042786
      RAFL04-17-J20At1g49670 / oxidoreductase, zinc-binding dehydrogenase family
     
EC:1.1.1.103
L-threonine 3-dehydrogenase//alcohol dehydrogenase, zinc-dependent
      RAFL05-19-C06At3g56460 / oxidoreductase, zinc-binding dehydrogenase family
     
EC:1.1.1.103
L-threonine 3-dehydrogenase//alcohol dehydrogenase, zinc-dependent
      RAFL04-18-H23At1g08110 / glyoxalase I, putative (lactoylglutathione lyase)
     
EC:4.4.1.5
4-hydroxyphenylpyruvate dioxygenase
   isoleucine biosynthesis I 2238544180.0466700570.233350295
      RAFL06-16-L13At5g54960 / pyruvate decarboxylase (gb|AAB16855.1)
     
EC:4.1.3.18
acetolactate synthase
      RAFL09-18-P18At3g48560 / acetolactate synthase
     
EC:4.1.3.18
acetolactate synthase
   valine biosynthesis 2238544180.0466700570.233350295
      RAFL06-16-L13At5g54960 / pyruvate decarboxylase (gb|AAB16855.1)
     
EC:4.1.3.18
acetolactate synthase
      RAFL09-18-P18At3g48560 / acetolactate synthase
     
EC:4.1.3.18
acetolactate synthase
Cluster:9-1 ABCDPP'N
   homocysteine and cysteine interconversion 294045674.1952432E-44.1952432E-41
      RAFL05-18-H15At1g64660 / methionine/cystathionine gamma lyase -related
     
EC:4.4.1.8
cystathionine beta-lyase
      RAFL11-02-N11At1g64660 / methionine/cystathionine gamma lyase -related
     
EC:4.4.1.8
cystathionine beta-lyase
   methionine degradation II 294045674.1952432E-44.1952432E-41
      RAFL05-18-H15At1g64660 / methionine/cystathionine gamma lyase -related
     
EC:4.4.1.11
1-aminocyclopropane-1-carboxylate synthase
      RAFL11-02-N11At1g64660 / methionine/cystathionine gamma lyase -related
     
EC:4.4.1.11
1-aminocyclopropane-1-carboxylate synthase
   vitamin E biosynthesis 294445630.0059619560.0238478244
      RAFL11-09-O05At1g06570 / 4-hydroxyphenylpyruvate dioxygenase (HPD)