MethodologyA community resource for high-throughput quantitative RT-PCR analysis of transcription factor gene expression in Medicago truncatula1 Max-Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476 Potsdam-Golm, Germany 2 The J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD, 20850, USA 3 The Samuel Roberts Noble Foundation, 2510 Sam Noble Parkway, Ardmore, OK, 73401, USA
Plant Methods 2008, 4:18doi:10.1186/1746-4811-4-18
Additional filesAdditional file 1: Complete list of TF genes, primer sequences and corresponding PCR efficiencies. The TF primer platform was established based on the data for the gene models according to SA, specific amplification; NA, no amplification; NS, non-specific amplification. RT-PCR products of primer sequences indicated in bold were sequenced. Format: XLS Size: 305KB Download file This file can be viewed with: Microsoft Excel Viewer Additional file 2: Complete list of TF genes, gene families and experimental data. Shown are the Medicago gene Accession Numbers (TIGR) in ascending order, the TC number if available, as well as the transcription factor family and the subfamily names. The next columns show experimental results for the real-time RT-PCR reactions performed on six different organs of Medicago in three indipendent biological replicates, as explained in the manuscript. CT = not normalized CT value, ΔCT = CT value normalized against the geometric mean of 4 house keeping genes; ΔΔCT = power(PCReff;-ΔCT); log2 ΔΔCT = logarithmus of ΔCT. Format: XLS Size: 2.1MB Download file This file can be viewed with: Microsoft Excel Viewer |





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