Plant Methods

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A quantitative RT-PCR platform for high-throughput expression profiling of 2500 rice transcription factors

Camila Caldana, Wolf-Rüdiger Scheible, Bernd Mueller-Roeber* and Slobodan Ruzicic

Plant Methods 2007, 3:7 doi:10.1186/1746-4811-3-7

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BioMed Central: 8 citations

Research article   Open Access

Validation of a set of reference genes to study response to herbicide stress in grasses

Cécile Petit, Fanny Pernin, Jean-Marie Heydel, Christophe Délye BMC Research Notes 2012, 5:18 (10 January 2012)

Research article   Open Access

Reference genes for quantitative reverse transcription-polymerase chain reaction expression studies in wild and cultivated peanut

Carolina V Morgante, Patricia M Guimarães, Andressa CQ Martins, Ana CG Araújo, Soraya CM Leal-Bertioli, David J Bertioli, Ana CM Brasileiro BMC Research Notes 2011, 4:339 (9 September 2011)

Research article   Open Access

Transcript profiling of crown rootless1 mutant stem base reveals new elements associated with crown root development in rice

Yoan Coudert, Martine Bès, Thi Van Anh Le, Martial Pré, Emmanuel Guiderdoni, Pascal Gantet BMC Genomics 2011, 12:387 (1 August 2011)

Research article   Open Access Highly Accessed

Identification and validation of reference genes for quantitative RT-PCR normalization in wheat

Anna R Paolacci, Oronzo A Tanzarella, Enrico Porceddu, Mario Ciaffi BMC Molecular Biology 2009, 10:11 (20 February 2009)

Software   Open Access Highly Accessed

QuantPrime – a flexible tool for reliable high-throughput primer design for quantitative PCR

Samuel Arvidsson, Miroslaw Kwasniewski, Diego Riaño-Pachón, Bernd Mueller-Roeber BMC Bioinformatics 2008, 9:465 (1 November 2008)

Methodology article   Open Access Highly Accessed

Critical evaluation of methods used to determine amplification efficiency refutes the exponential character of real-time PCR

Robert G Rutledge, Don Stewart BMC Molecular Biology 2008, 9:96 (30 October 2008)

Measurement of template quantity in real-time qPCR using standard curves is prone to error, and the novel linear regression of efficiency method that calculates the amplification efficiency at the onset of each reaction is more accurate.

Methodology   Open Access

A community resource for high-throughput quantitative RT-PCR analysis of transcription factor gene expression in Medicago truncatula

Klementina Kakar, Maren Wandrey, Tomasz Czechowski, Tanja Gaertner, Wolf-Rüdiger Scheible, Mark Stitt, Ivone Torres-Jerez, Yongli Xiao, Julia C Redman, Hank C Wu, Foo Cheung, Christopher D Town, Michael K Udvardi Plant Methods 2008, 4:18 (8 July 2008)

Database   Open Access Highly Accessed

DATFAP: A Database of Primers and Homology Alignments for Transcription Factors from 13 Plant Species

Jakob Fredslund BMC Genomics 2008, 9:140 (25 March 2008)